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. 2011 Oct;79(10):4105–4121. doi: 10.1128/IAI.01390-10

Table 1.

Oligonucleotide primers used for mutant production

Gene Oligonucleotide sequences of primersa Enzyme Resistance cassette
argA TCACTCGAGGCAAAGAGGTGTGCCGTG XhoI Km
GCCGCTGGGCCGCTGGGGTACCARGACGGCGTGG ATT KpnI
CTCGCCTCGTGCCATGGTACCCCAGCGGC KpnI
CGCAGATCTTAACCCTAAATCCGCCATCA BglII
potG TCACTCGAGACGAAAGTGAAGAGCGGA XhoI Km
GATAAAAAGCTGGGTACCAGGATGCACCTTGAA KpnI
CGACCACCGAGGCATGGTACCCAGCTTTTTATC KpnI
CGGAGATCTCCGTCGGCACCACACAGCTC BglII
csgA TCACTCGAGGGATCAAAACTATTGTCCGT XhoI Km
AATGCTCAGGTACCGCCGTTATGATTACC KpnI
ATAACGGCGGTACCTGAGCATTTATCAGT KpnI
CGCAGATCTTAGCGCAGACGCTAAATTAA BglII
metF CGTCTCGAGGACATGAAGAAAATTCAACT XhoI Km
TTATTCCAGGTACCGCTCTTTGATGCCTT KpnI
CAAAGAGCGGTACCTGGAATAACGGTATC KpnI
TCCAGATCTTGGCAAATGGCATAACTCAT BglII
ttrB TCACTCGACCGCTGATTCTCTGGAGGA XhoI Km
CTTGTACCGGGTACCCCGGCACAC AGG KpnI
GTCCCTGGATGCCTGGGTACCGGCCATAGG KpnI
CGCAGATCTTGGCAATGTGGACGGGAG BglII
ttrS TCACTCGACCCCGGCTTGTTGTTGATC XhoI Km
ACTGGGCCGGGTACCCGTCCACCAGTC KpnI
CCGCCTGAGCCGCATGGTACCCGCCCCAGT KpnI
GCGAGATCTTCATCCAGTAGATGAAT BglII
pduA TCACTCGACCCATGCGAGGTCTTTATG XhoI Km
CGCGGCGATGTTACCCGGTCAAAG KpnI
TGCATCGGTGGCCGCGGTAACATCGCCGCG KpnI
CGCAGATCTCCACCAGCTGACTGCTGC BglII
eutR TCACTCGACGAGAGCCTCCCCATCAAT XhoI Km
GTGGCCAGCGTTACCTGCACAAAGCCC KpnI
CTAGCGCTGGAGGTAGTTACCGCTGGCGAG KpnI
CGGAGATCTGTCGGAGGGCCGGGCGTC BglII
btuB TCACTCGACAAGCCTGCGGCATCCTCC XhoI Km
CTCCGCTATGGTACCTTCCGATGCTAT KpnI
GCGCTTTGTAGGAGGGGTACCATAGCGGAG KpnI
CGGAGATCTCGGTGGGACGAGGTTCAG BglII
cobS GATCTAGAACGAATCTGCTGTTTGCGCT XhoI Km
CAGCAGGGTACCTAGCGGAATACCACACCAG KpnI
CCGCTAGGTACCCTGCTGACCGGTGGTTTTCA KpnI
AGTCTAGAACAGAGCCAGCAGAAAGATC BglII
CAGCAGGGATCCTAGCGGAATACCACACCAGG BamH1 Spc
CCGCTAGGATCCCTGCTGACCGGTGGTTTTCA BamH1
cbiA CATCTAGAAAGGCATCACGCATTTATTC XhoI Km
CGTTATGGTACCAATGGCATTTTTGAGGAGCT KpnI
GCCATTGGTACCATACGGTGATGTTAAAACAT KpnI
TGTCTAGACAGCCAGTGCTGCACCATTT BglII
TAACATCACCGGATCCGCCGCCAG BamH1 Spc
AGCAATCATGGCATGGGATCCGGTGATGTT BamH1
a

Underlining and boldface indicate enzyme sites.