Table 1.
Homologues of FTT0789-FTT0800 cluster proteins
| Protein | Predicted function | Conserved domain(s) | Nearest homologuea | No. of identical or similar residues (n)b | Homologue in F. tularensis subsp. holarctica | Homologue in F. novicida |
|---|---|---|---|---|---|---|
| FTT0789 (Rpe) | d-Ribulose-phosphate 3-epimerase | Ribulose-5-phosphate 3-epimerase | Ribulose-phosphate 3-epimerase [Vibrio fischeri ES114] (YP_205671.1) | 148 identical and 172 similar (222) | d-Ribulose-phosphate 3-epimerase (YP_514087.1) | d-Ribulose-phosphate 3-epimerase (YP_898856.1) |
| FTT0790 | Sugar transferase family protein | Bacterial sugar transferase | Bacterial sugar transferase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] (ZP_06439449) | 146 identical and 227 similar (385) | Sugar transferase family protein (YP_514086.1) | Sugar transferase involved in lipopolysaccharide synthesis (YP_898855.1) |
| FTT0791 (GalE) | UDP-glucose 4-epimerase | UDP-glucose-4-epimerase | UDP-glucose 4-epimerase [Bacillus subtilis subsp. subtilis strain 168] (ZP_03593702) | 207 identical and 246 similar (327) | Glycosyltransferases group 1 family protein (YP_514084.1) | Glycosyltransferase, group 1 (YP_898853.1) |
| FTT0792 | Glycosyltransferase | GT1_like_4, RfaG | Glycosyltransferase WbpZ [Yersinia rohdei ATCC 43380] (ZP_04611468) | 171 identical and 255 similar (407) | Glycosyltransferase group 1 family protein (YP_514084) | Glycosyltransferase, group 1 (YP_898853) |
| FTT0793 | ABC transporter, ATP-binding protein, and membrane protein | d03251, ABCC_MsbA | ATPase [Roseburia intestinalis L1-82] (ZP_04742579) | 199 identical and 332 similar (577) | ABC transporter, ATP-binding protein, and membrane protein (YP_514083.1) | ABC transporter, ATP-binding protein (YP_898852.1) |
| FTT0794 | Hypothetical protein | Bifunctional protein cd02523, PC_cytidylyltransferase | Phosphoserine phosphatase, SerB [Helicobacter hepaticus ATCC 51449] (NP_859609) | 108 identical and 143 similar (195) | Hypothetical protein (FTL_1427 and YP_514082.1) | No homologue |
| FTT0795 | Hypothetical protein | pfam08242, methyltransf_12, methyltransferase domain | Methyltransferase type 12 [Desulfovibrio desulfuricans subsp. desulfuricans strain ATCC 27774] (YP_002479604.1) | 88 identical and 135 similar (185) | Hypothetical protein (FTL_1426 and YP_514081.1) | No homologue |
| FTT0796 | Hypothetical protein | LicC superfamily pfam04991 | LicD family protein [Clostridium perfringens C strain JGS1495] (EDS80936.1) | 31 identical and 47 similar (77) | Hypothetical protein (FTL_1425 and YP_514080.1) | No homologue |
| FTT0797 | Glycosyltransferase family protein | cd00761:Glyco_tranf_GTA_type | TagF domain-containing protein [Enterococcus faecalis T2] (ZP_05425945.1) | 98 identical and 144 similar (227) | Glycosyltransferase family protein (YP_514079.1) | Glycosyltransferase family protein (YP_898849) |
| FTT0798 | Glycosyltransferase family protein | cd00761:Glyco_tranf_GTA_type | TagF domain-containing protein [Enterococcus faecalis T2] (ZP_05425945.1) | 101 identical and 174 similar (315) | Glycosyltransferase family protein (YP_514078.1) | Glycosyltransferase family protein (YP_898848.1) |
| FTT0799 | Glycosyltransferase group 1 family protein | d03809, GT1_mtfB_like | Putative glycosyltransferase, group 1 [Leptospirillum rubarum] (EAY56975.1) | 114 identical and 80 similar (333) | Glycosyltransferase group 1 family protein (YP_514077.1) | Glycosyltransferase group 1 family protein (YP_898847.1) |
| FTT0800 | Haloacid halogenase-like hydolase family protein | Predicted hydrolase (HADc superfamily), Pyr-5-nucleotidase, pyrimidine 5′-nucleotidase | HAD superfamily hydrolase [“Candidatus Pelagibacter ubique” HTCC1062] (YP_265889.1) | 80 identical and 129 similar (212) | HAD family hydrolase (YP_001428940.1) | No homologue |
a
For the homologue columns, the homologue is shown first. The species is shown in brackets, and the NCBI accession number is shown in parentheses.
b
The number of residues identical to those of F. tularensis SchuS4 (number of invariant residues) and the number of similar residues (number of invariant and/or conserved residues) are shown. The total number of residues (n) is shown in parentheses.
c
HAD, haloacid dehalogenase.