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. Author manuscript; available in PMC: 2011 Oct 6.
Published in final edited form as: Virology. 2006 Sep 28;358(2):373–383. doi: 10.1016/j.virol.2006.08.039

Table 1.

Mean Frequency of SIV Envelope Mutations in Plasma and CSF by Variable Region from Morphine-dependent and Control Macaques

Group Monkey Number Sampling Time (week) Mean frequency of mutations by variable regiona
Plasma CSF

Morphine No. of clones V3 V4 V5 No. of clones V3 V4 V5

Rapid 1/04L 12 9 0.333 1.889 0.667 7 0.143 0.571 0.429
18 7 0.286 1.857 0.286 9 0.111 1.110 0.444
1/28Q 12 7 0 0.429 0.857 7 0.142 0.714 1.143
18 6 0 0.500 0.167 5 0 0.400 0.800
1/42N 12 7 0.143 1.000 0.429 8 0 1.250 0.125
18 8 0 0.625 0.125 5 0.200 0.200 0
Normal 1/02N 12 10 0.200 0.400 0.100 7 0 0.571 0.857
18 6 0.500 0.167 0 9 0 0.556 0.556
1/52N 12 3 0 0.333 0.667 6 0 0.375 0
18 9 0 0.222 0 9 0 1.000 0.111
1/56L 12 8 0.125 0 0 8 0 0.250 0.125
18 8 0.125 0 0.125 9 0 0.333 0.333

Control
2/02P 12 8 0 0.250 0.375 6 0.167 0 0
18 7 0.571 0.143 0.286 7 0.286 0 0
2/31P 12 5 0 0 0.400 7 0.143 0 0.143
18 5 0 0.200 0 2 0 0 0
2/AC42 12 5 0.250 0 0 7 0 0 0.143
18 7 0.143 0 0.286 5 0 0 0
a

Mean frequency of mutation by variable region was region in a monkey at a given time point divided