Figure 2.

Comparative genomics for aligning P. larvae contigs.MUMmer-generated dot-plot showing P. larvae contigs (y-axis) aligned with the fully-sequenced genomes of (a) P. JDR2 and (b) P. vortex (x-axes). Proteins sequences were used for matching. Red dots indicate same-direction matches and blue dots represent antisense matches. Magnified views of regions from (a) exemplify P. larvae contigs that are (c) highly conserved and (d) poorly conserved with P. JDR2; the same contigs are also compared in P. vortex (e).