Table 3.
Putative P. larvae flagellar proteins
| Gene | Protein, functional information from CDD | P. larvae protein accession | |
|---|---|---|---|
| Two component system chemotaxis proteins | cheA | CheA, sensor kinase [EC:2.7.13.3] | EFX46098; EFX46097 |
| cheW | CheW, purine-binding protein | EFX46097 | |
| cheX | CheX | Not found | |
| cheC | CheC | EFX44110; EFX46096 | |
| cheD | CheD [EC:3.5.1.44] | EFX46095 | |
| cheR | CheR, methyltransferase [EC:2.1.1.80] | EFX46532 | |
| cheB | CheB, response regulator [EC:3.1.1.61] | EFX46099 | |
| cheY | CheY, response regulator | EFX46498; EFX46108 | |
| cheZ | CheZ | EFX46498 | |
| cheV | CheV, response regulator | EFX46097; EFX46099 | |
| Methyl-accepting chemotaxis proteins | mcp | methyl-accepting chemotaxis protein | EFX44725; EFX44051; EFX45552; EFX46097 |
| tsr | McpI, serine sensor receptor | EFX44051; EFX44725 | |
| tar | McpII, aspartate sensor receptor | EFX44725; EFX46877 | |
| trg | McpIII, ribose and galactose sensor receptor | EFX44725 | |
| tap | McpIV, peptide sensor receptor | Not found | |
| aer | Aerotaxis receptor | EFX44725; EFX46877 | |
| hemAT | haem-based aerotactic transducer | EFX44725; EFX46877 | |
| Type-III secretion proteins for flagellar assembly | fliH | FliH | EFX46029 |
| fliI | FliI, flagellum-specific ATP synthase [EC:3.6.3.14] | EFX46028 | |
| fliZ, fliO | FliO/FliZ | EFX46107 | |
| fliP | FliP, flagellar biosynthetic protein | EFX46106 | |
| fliQ | FliQ, flagellar biosynthetic protein | EFX46105 | |
| fliR | FliR, flagellar biosynthetic protein | EFX46104 | |
| flhA | FlhA, flagellar biosynthesis protein | EFX46102 | |
| flhB | FlhB, flagellar biosynthetic protein | EFX46103 | |
| flhE | FlhE | Not found | |
| flhF | FlhF, flagellar biosynthetic protein | EFX46101 | |
| Motor/Switch | motA | MotA, chemotaxis protein | EFX45489 |
| motB | MotB, chemotaxis protein | EFX45490 | |
| C-ring | fliG | FliG, flagellar motor switch protein | EFX46030 |
| fliM | FliM, flagellar motor switch protein | EFX46110 | |
| fliNY, fliN | FliN/FliY, flagellar motor switch protein | EFX46109 | |
| M, S, P and L rings | fliF | FliF, flagellar M-ring protein | EFX46031 |
| flgI | FlgI, flagellar P-ring protein precursor | not found | |
| flgA | FlgA, flagella basal body P-ring formation protein | not found | |
| flgH | FlgH, flagellar L-ring protein precursor | not found | |
| fliF | FliF, flagellar M-ring protein | EFX46031 | |
| flgA | FlgA, flagella basal body P-ring formation protein | not found | |
| flgH | FlgH, flagellar L-ring protein precursor | not found | |
| Rod, hook, and filament | flgB | FlgB, flagellar basal-body rod protein | EFX46034 |
| flgC | FlgC, flagellar basal-body rod protein | EFX46033 | |
| flgD | FlgD, flagellar basal-body rod modification protein | not found | |
| flgF | FlgF, flagellar basal-body rod protein | EFX46113; EFX45368 | |
| flgG | FlgG, flagellar basal-body rod protein | EFX46113; EFX45367 | |
| flgJ | FlgJ, flagellar protein | not found | |
| flgE | FlgE, flagellar hook protein | EFX46113 | |
| fliE | FliE, flagellar hook-basal body complex protein | EFX46032 | |
| flgK | FlgK, flagellar hook-associated protein 1 | EFX46010 | |
| flgL | FlgL, flagellar hook-associated protein 3 | EFX46011 | |
| fliD | FliD, flagellar hook-associated protein 2 | EFX46016 | |
| fliK | FliK, flagellar hook-length control protein | not found | |
| fliL | FliL, flagellar protein | EFX46111 | |
| fliC | Flagellin | EFX46015 | |
| flaF | FlaF, flagellar protein | EFX46015 | |
| flaG | FlaG, flagellar protein | not found | |
| flbA | FlbA, flagellar protein | EFX46102 | |
| flbB | FlbB, flagellar protein | not found | |
| flbC | FlbC, flagellar protein | not found | |
| flbD | FlbD, flagellar protein | not found | |
| flbT | FlbT, flagellar protein | not found | |
| Regulation | flhC | FlhC, flagellar transcriptional activator | not found |
| flhD | FlhD, flagellar transcriptional activator | not found | |
| fliA | FliA, RNA polymerase sigma factor for flagellar operon | EFX44501;EFX46093; EFX43745; EFX44502 | |
| flgM | FlgM, negative regulator of flagellin synthesis | not found | |
| Chaperones | flgN | FlgN, flagella synthesis protein | not found |
| fliJ | FliJ, flagellar protein | EFX46027 | |
| fliS | FliS, flagellar protein | EFX46017 | |
| fliT | FliT, flagellar protein | not found | |
| fliW | FliW, flagellar assembly factor | EFX46013 | |
| fliY | FliY, cystine transport system substrate-binding protein | EFX46109 | |
| fliZ | FliZ | EFX46107 | |
| Archaeal flagellar proteins | flaA-A, flaA | FlaA, archaeal flagellin | EFX46015 |
| flaB-A, flaB | FlaB, archaeal flagellin | EFX46015 | |
| flaC-A, flaC | FlaC | EFX46015 | |
| flaD-A, flaD | FlaD | EFX46015 | |
| flaE-A, flaE | FlaE | EFX46113 | |
| flaF-A, flaF | FlaF | EFX46015 | |
| flaG-A, flaG | FlaG | not found | |
| flaH-A, flaH | FlaH | not found | |
| flaI-A, flaI | FlaI | not found | |
| flaJ-A, flaJ | FlaJ | not found | |
| flaK-A, flaK | FlaK, archaeal preflagellin peptidase | not found | |