Skip to main content
Nucleic Acids Research logoLink to Nucleic Acids Research
. 1984 Jul 11;12(13):5341–5354. doi: 10.1093/nar/12.13.5341

Distal regulatory functions for the uvrC gene of E. coli.

S Sharma, T Stark, R E Moses
PMCID: PMC318923  PMID: 6087282

Abstract

We find that the uvrC gene is preceded by three promoters (P1, P2 and P3), identified by heparin-resistant RNA polymerase-DNA complex formation, P2 and P3 promoters are located proximal to the 5' end of the uvrC gene, while the P1 promoter is separated from the uvrC structural gene by an interposed DNA region of more than 1 kb. We have reported that P2 and P3 are not sufficient to promote uvrC complementation. However, plasmids containing the direct fusion of the P1 promoter to the uvrC gene complements the uvrC defect. Insertion of IS1 downstream from the P1 promoter leads to efficient synthesis of the uvrC protein as measured in maxicells. Fusion of the lac promoter to the uvrC structural gene can substitute for in vivo regulatory functions. We conclude that uvrC protein synthesis is controlled in a complex manner and that a distal promoter, P1, is required.

Full text

PDF
5341

Images in this article

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Backendorf C., Brandsma J. A., Kartasova T., van de Putte P. In vivo regulation of the uvrA gene: role of the "-10" and "-35" promoter regions. Nucleic Acids Res. 1983 Sep 10;11(17):5795–5810. doi: 10.1093/nar/11.17.5795. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Howard-Flanders P., Boyce R. P., Theriot L. Three loci in Escherichia coli K-12 that control the excision of pyrimidine dimers and certain other mutagen products from DNA. Genetics. 1966 Jun;53(6):1119–1136. doi: 10.1093/genetics/53.6.1119. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Kenyon C. J., Walker G. C. Expression of the E. coli uvrA gene is inducible. Nature. 1981 Feb 26;289(5800):808–810. doi: 10.1038/289808a0. [DOI] [PubMed] [Google Scholar]
  4. Lindahl T. DNA repair enzymes. Annu Rev Biochem. 1982;51:61–87. doi: 10.1146/annurev.bi.51.070182.000425. [DOI] [PubMed] [Google Scholar]
  5. Little J. W., Mount D. W. The SOS regulatory system of Escherichia coli. Cell. 1982 May;29(1):11–22. doi: 10.1016/0092-8674(82)90085-x. [DOI] [PubMed] [Google Scholar]
  6. Machida Y., Machida C., Ohtsubo H., Ohtsubo E. Factors determining frequency of plasmid cointegration mediated by insertion sequence IS1. Proc Natl Acad Sci U S A. 1982 Jan;79(2):277–281. doi: 10.1073/pnas.79.2.277. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Ohta A., Waggoner K., Radominska-Pyrek A., Dowhan W. Cloning of genes involved in membrane lipid synthesis: effects of amplification of phosphatidylglycerophosphate synthase in Escherichia coli. J Bacteriol. 1981 Aug;147(2):552–562. doi: 10.1128/jb.147.2.552-562.1981. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Reynolds A. E., Felton J., Wright A. Insertion of DNA activates the cryptic bgl operon in E. coli K12. Nature. 1981 Oct 22;293(5834):625–629. doi: 10.1038/293625a0. [DOI] [PubMed] [Google Scholar]
  9. Roberts T. M., Lauer G. D. Maximizing gene expression on a plasmid using recombination in vitro. Methods Enzymol. 1979;68:473–482. doi: 10.1016/0076-6879(79)68036-9. [DOI] [PubMed] [Google Scholar]
  10. Sancar A., Clarke N. D., Griswold J., Kennedy W. J., Rupp W. D. Identification of the uvrB gene product. J Mol Biol. 1981 May 5;148(1):63–76. doi: 10.1016/0022-2836(81)90235-7. [DOI] [PubMed] [Google Scholar]
  11. Sancar A., Hack A. M., Rupp W. D. Simple method for identification of plasmid-coded proteins. J Bacteriol. 1979 Jan;137(1):692–693. doi: 10.1128/jb.137.1.692-693.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Sancar A., Rupert C. S. Determination of plasmid molecular weights from ultraviolet sensitivities. Nature. 1978 Mar 30;272(5652):471–472. doi: 10.1038/272471a0. [DOI] [PubMed] [Google Scholar]
  13. Sancar A., Rupp W. D. A novel repair enzyme: UVRABC excision nuclease of Escherichia coli cuts a DNA strand on both sides of the damaged region. Cell. 1983 May;33(1):249–260. doi: 10.1016/0092-8674(83)90354-9. [DOI] [PubMed] [Google Scholar]
  14. Sancar A., Wharton R. P., Seltzer S., Kacinski B. M., Clarke N. D., Rupp W. D. Identification of the uvrA gene product. J Mol Biol. 1981 May 5;148(1):45–62. doi: 10.1016/0022-2836(81)90234-5. [DOI] [PubMed] [Google Scholar]
  15. Sharma S., Dowhan W., Moses R. E. Molecular structure of uvrC gene of Escherichia coli: identification of DNA sequences required for transcription of the uvrC gene. Nucleic Acids Res. 1982 Sep 11;10(17):5209–5221. doi: 10.1093/nar/10.17.5209. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Sharma S., Ohta A., Dowhan W., Moses R. E. Cloning of the uvrC gene of Escherichia coli: expression of a DNA repair gene. Proc Natl Acad Sci U S A. 1981 Oct;78(10):6033–6037. doi: 10.1073/pnas.78.10.6033. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Shine J., Dalgarno L. Determinant of cistron specificity in bacterial ribosomes. Nature. 1975 Mar 6;254(5495):34–38. doi: 10.1038/254034a0. [DOI] [PubMed] [Google Scholar]
  18. Smith H. O., Birnstiel M. L. A simple method for DNA restriction site mapping. Nucleic Acids Res. 1976 Sep;3(9):2387–2398. doi: 10.1093/nar/3.9.2387. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Strauss H. S., Boston R. S., Record M. T., Jr, Burgess R. R. Variables affecting the selectivity and efficiency of retention of DNA fragments by E. coli RNA polymerase in the nitrocellulose-filter-binding assay. Gene. 1981 Jan-Feb;13(1):75–87. doi: 10.1016/0378-1119(81)90045-7. [DOI] [PubMed] [Google Scholar]
  20. Yoakum G. H., Grossman L. Identification of E. coli uvrC protein. Nature. 1981 Jul 9;292(5819):171–173. doi: 10.1038/292171a0. [DOI] [PubMed] [Google Scholar]
  21. van Sluis C. A., Moolenaar G. F., Backendorf C. Regulation of the uvrC gene of Escherichia coli K12: localization and characterization of a damage-inducible promoter. EMBO J. 1983;2(12):2313–2318. doi: 10.1002/j.1460-2075.1983.tb01739.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. van den Berg E., Zwetsloot J., Noordermeer I., Pannekoek H., Dekker B., Dijkema R., van Ormondt H. The structure and function of the regulatory elements of the Escherichia coli uvrB gene. Nucleic Acids Res. 1981 Nov 11;9(21):5623–5643. doi: 10.1093/nar/9.21.5623. [DOI] [PMC free article] [PubMed] [Google Scholar]

Articles from Nucleic Acids Research are provided here courtesy of Oxford University Press

RESOURCES