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. 2011 Sep 19;12(9):6116–6134. doi: 10.3390/ijms12096116

Table 1.

List of marker genes, their references and Taqman probes used in this study.

# Gene Name Accession No. Probe Name Organ Ref.
1 GADD153 DNA-damage-inducible 3 NM_007837.3 Mm00492097_m1 liver [7,21]
2 SAA3 serum amyloid A 3 NM_011315.3 Mm00441203_m1 liver, lung [22]
3 TIMP3 metallopeptidase inhibitor 3 NM_011595.2 Mm00441827_m1 liver, lung [22]
4 PEPCK phosphoenolpyr. carboxykinase NM_011044.2 Mm00440636_m1 liver [5]
5 NOX3 NADPH oxidase 3 NM_198958.2 Mm01339132_m1 kidney [6]
6 Hsd3b4 hydroxy-d-5-steroid dehyd. NM_001111336 Mm00843753_s1 liver [7]
7 Clu clusterin NM_013492.2 Mm00442773_m1 kidney, liver [7,11]
8 Spp1 secreted phosphoprotein 1 NM_001204201 Mm00436767_m1 kidney [11]
9 vim vimentin NM_011701 Mm01333430_m1 kidney [11]
10 Anxa2 annexin A2 NM_007585.3 Mm00500307_m1 kidney [23]
11 Tubb5 tubulin, beta 5 NM_011655.5 Mm00495804_m1 kidney [11]
12 Gstp2 glutathione S-transferase, pi 2 NM_181796.2 Mm00839138_g1 kidney [7]
13 Fga fibrinogen alpha chain NM_001111048 Mm00802584_m1 kidney [24]
14 Ccng1 cyclin G1 NM_009831.2 Mm00438084_m1 kidney [11]
15 Klk1b3 kallikrein 1-related peptidase b3 NM_008693.2 Mm01203825_gH kidney [11]
16 Odc1 ornithine decarboxylase 1 NM_013614.2 Mm01964631_g1 kidney [11]
17 Kap kidney androgen regulated prot. NM_010594.2 Mm00495104_m1 kidney [11]
18 Oat ornithine aminotransferase NM_016978.2 Mm00497544_m1 kidney [11]
19 Rbp4 retinol binding protein 4 NM_001159487 Mm00803266_m1 kidney [11]
20 Aadat aminoadipate aminotransferase NM_011834.2 Mm00496169_m1 kidney [11]
21 Egf epidermal growth factor NM_010113.3 Mm01316968_m1 kidney [11]
22 Pgam2 phosphoglycerate mutase 2 NM_018870.3 Mm00450782_g1 heart [25]
23 Hsd17b4 hydroxysteroid dehydrogenase 4 NM_008292.4 Mm00500443_m1 heart [25]
24 Idh3B isocitrate dehydrogenase 3 beta NM_130884.4 Mm00504589_m1 heart [25]
25 Ndufa5 NADH dehydrogenase 1 alpha 5 NM_026614.2 Mm00471676_g1 heart [25]
26 Prdx3 peroxiredoxin 3 NM_007452.2 Mm00545848_m1 heart [25]
27 Alox12b arachidonate 12-lipoxygenase NM_009659.2 Mm00507782_m1 heart, brain [26]
28 Reg3a regenerating islet-derived 3a NM_011259.1 Mm00441121_m1 heart, liver [27]
29 Cyp1a1 cytochrome P450, family 1a1 NM_001136059 Mm00487218_m1 liver [7]
30 SERPINE1 serine peptidase inhibitor E1 NM_008871.2 Mm00435860_m1 heart, kidney [28]
31 CYP7A1 cytochrome P450, family 7a1 NM_007824.2 Mm00484152_m1 heart, liver [29]
32 Akr1b8 aldo-keto reductase family 1B8 NM_008012.1 Mm00484314_m1 spleen [12]
33 FABP4 fatty acid binding protein 4 NM_024406.2 Mm00445878_m1 spleen [12]
34 Ptpmt1 protein tyrosine phosphatase 1 NM_025576.2 Mm00458631_m1 spleen [30]
35 HINT1 histidine triad nucl. binding prot. NM_008248.2 Mm00801722_m1 spleen [30]
36 PSMB8 proteasome subunit, beta 8 NM_010724.2 Mm00440207_m1 spleen [30]
37 Hoxa2 homeobox A2 NM_010451.1 Mm00439361_m1 brain [22]
38 DNAJA2 DnaJ (Hsp40) homolog,A2 NM_019794.4 Mm00444898_m1 lung, liver [7,13]
39 OAZI antizyme inhibitor 1 NM_001102458 Mm00497630_m1 lung [13]
40 SLC25A6 solute carrier family 25A6 NM_026255.5 Mm00470958_m1 lung [13]
41 SERPINCI serpin peptidase inhibitor, C1 NM_000488.3 Mm00446573_m1 lung [13]
42 HSPCB heat shock protein 90 alpha B1 NM_008302.3 Mm00833431_g1 lung [13]
43 UBC ubiquitin C NM_019639.4 Mm01201237_m1 lung [13]
44 TIMP2 tissue inhib. metalloprot. 2 NM_011594.3 Mm00441825_m1 lung [13]
45 FAS Fas (TNF receptor superfamily 6) NM_001146708 Mm01204974_m1 liver [31,32]
46 PCNA proliferating cell nuclear antigen NM_011045.2 Mm00448100_g1 liver [7,11]
47 PRDX1 peroxiredoxin 1 NM_011034.4 Mm01621996_s1 liver, lung [7]
48 Ephx1 epoxide hydrolase 1 NM_010145.2 Mm00468752_m1 spleen [7]
49 Hspa1a heat shock protein 1A NM_010479.2 Mm01159846_s1 liver [7]
50 SOD1 superoxide dismutase 1 NM_011434.1 Mm01344233_g1 liver, heart [7]
51 Ftl1 ferritin light chain 1 NM_010240.2 Mm03030144_g1 liver, spleen [12]
52 Nqo1 NAD(P)H dehydrogenase 1 NM_008706.5 Mm00500821_m1 liver [7]
53 c-Fos FBJ osteosarcoma oncogene NM_010234.2 Mm00487425_m1 liver [7,21]
54 PPIA peptidylprolyl isomerase A NM_008907.1 Mm02342430_g1 control -
55 PGK1 phosphoglycerate kinase 1 NM_000291.3 Mm00435617_m1 control -
56 RPLP0 ribosomal protein, large, P0 NM_007475.5 Mm00725448_s1 control -