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. 2011 Jun 28;20(9):1566–1575. doi: 10.1002/pro.685

Figure 6.

Figure 6

Univariate optimization of bond length. Mo1 is the initial position of one moving atom of the loop. M1 is the position of the moving atom after some change of bond distance d. F1 refers to the target atom of the loop. d is the bond length between atoms C and D, and Δd is its variation.