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. 2011 Jun 7;286(34):30071–30086. doi: 10.1074/jbc.M111.253518

TABLE 3.

Genes with higher expression in Mef2c shRNA knockdown cells (Sh3)

Genes that exhibit higher expression after Mef2c knockdown (Sh3) relative to control (Shlux) at days 3, 10, and 19 during osteoblast differentiation. For these genes, knockdown of Mef2c results in increased expression in Sh3 cells. Fold represents the ratio of gene expression, Sh3 relative to Shlux.

Day 3
Day 10
Day 19
Symbol Accession Fold Symbol Accession no. Fold Symbol Accession no. Fold
Ly6a NM_010738 3.9 Ccl7 NM_013654 7.5 Ccl7 NM_013654 7.1
Tnnc1 NM_009393 3.2 Abi3bp NM_178790 4.6 Abi3bp NM_178790 5.9
Ly6c1 NM_010741 3.2 Ly6a NM_010738 4.6 Ly6a NM_010738 5.1
Loc100047583 XM_001479138 2.76 Scl0002547.1_9 scl0002547.1_9 4.1 Nme7 NM_138314 4.8
Tgm2 NM_009373 2.7 Ifi27 NM_029803 4.0 Txnip NM_023719 4.4
Gdpd2 NM_023608 2.5 Txnip NM_023719 3.8 Ecrg4 NM_024283 4.4
Pappa NM_021362 2.4 Ccl5 NM_013653 3.7 Htra3 NM_030127 4.2
6330406i15rik NM_027519 2.4 Dcn NM_007833 3.5 Atp1b1 NM_009721 3.8
Wisp2 NM_016873 2.3 Klra4 NM_010649 3.5 Mfap4 NM_029568 3.7
Nme7 NM_138314 2.3 Ly6c1 NM_010741 3.5 Papss1 NM_011863 3.6
Loc382972 XM_356781 2.3 1500015o10rik NM_024283 3.2 Robo1 NM_019413 3.4
Idb4 AK041164 2.2 Figf NM_010216 3.0 Ly6c1 NM_010741 3.3
Ifit3 NM_010501 2.2 Loc100038894 XM_001471776 3.0 Chst2 NM_018763 3.1
6330406i15rik NM_027519 2.2 Ccl2 NM_011333 3.0 Htra1 NM_019564 3.1
Ppap2b NM_080555 2.1 Tnn NM_177839 2.9 Mrgprf NM_145379 3.1
B230343a10rik scl41403.1.1_37 2.1 Lum NM_008524 2.9 Casp1 NM_009807 3.0
Abca3 NM_013855 2.1 Syt1 NM_009306 2.9 Alox5ap NM_009663 3.0
Nme7 NM_138314 2.1 Txnip NM_001009935 2.9 Il33 NM_133775 3.0
Cdkl5 NM_001024624 2.1 Cdkl5 NM_001024624 2.9 Cxx1a NM_024170 3.0
Sdpr NM_138741 2.1 Id4 NM_031166 2.8 Pigt NM_133779 2.9