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. 2011 Oct 12;6(10):e25463. doi: 10.1371/journal.pone.0025463

Table 3. Components of the post-translational machinery present in PML NBs.

Type of modification Protein name Uniprot accession number effect
Acetylation CBP Q92793 +
p300 Q09472 +
TIP60 Q92993 +
HDAC1 Q13547
HDAC2 Q92769
HDAC3 O15379
HDAC7 Q8WUI4
SIRT1 Q96EB6
Methylation PRMT1 Q99873 +
EZH2 Q15910 +
Phosphorylation CK1 P48729 +
CK2 P68400 +
MNK2b Q9HBH9 +
p38 Q16539 +
IKKe Q14164 +
ATR Q13535 +
ATM Q13315 +
mTOR P42345 +
STK6 O14965 +
CHK2 O96017 +
HIPK1 Q86Z02 +
HIPK2 Q9H2X6 +
HIPK3 Q9H422 +
ZIPK O43293 +
SUMOylation SUMO-1 P63165
SUMO-2 P61956
SUMO-3 P55854
UBA2 Q9UBT2 +
UBC9 P63279 +
PIASy Q8N2W9 +
RANBP2 P49792 +
MMS21 Q96MF7 +
SENP1 Q9P0U3
SENP2 Q9HC62
SENP5 Q96HI0
Ubiquitination TOPORS Q9NS56 +
BRCA1 P38398 +
RNF6 Q9Y252 +
RBCK1 Q9BYM8 +
MDM2 Q00987 +
E6AP Q05086 +
FBX3/SCF Q9UK99 +
CULLIN1 Q13616 +
SKP1 P63208 +
PLZF Q05516 +
UBP7 Q93009

Enzymes involved in post-translational modifications of proteins and described as associated with PML Nuclear Bodies, according to Van Damme et al. [34]. These proteins represent about 30% of all proteins associated with PML NBs, highlighting a potential integrative role of PML NBs in post-translational maturation of nuclear proteins. Proteins followed by a + sign are mainly involved in the transfer of post-translational moieties to protein substrates (e.g. kinases), whereas those with a − sign are associated to protein demodification (e.g. phosphatases). Uniprot accession IDs are in italic.