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. Author manuscript; available in PMC: 2012 Oct 19.
Published in final edited form as: J Am Chem Soc. 2011 Sep 22;133(41):16642–16649. doi: 10.1021/ja207086x

Table 4.

Tm, in vitro and in vivo activity of FHNA, HNA and LNA gapmer ASOs targeting mouse PTEN mRNA.

ASOa Tm (°C)b vs Tm (°C)c vs IC50 ED50 ED50

14-mer RNA 20-mer RNA (μM)d (mg/kg)e (mg/kg)f
FHNA A1 53.9 60.1 2.3 7.8 2.2
HNA A2 54.9 58.0 2.4 13.8 NT
LNA A3 61.1 65.4 1.5 7.2 2.1
a

Sequence used for evaluation mCTTAGCACTGGCmCT; bold letters indicate modified residues in flanks and uppercase letters indicate 2′-deoxynucleotides in the gap; all linkages are phosphorothioate modified

b

Sequence of 14-mer RNA complement 5′-r(AGGCCAGUGCUAAG)-3′

c

Sequence of 20-mer RNA complement 5′-r(UCAAGGCCAGUGCUAAGAGU)-3′

d

IC50 for PTEN mRNA reduction in mouse bEND cells with electroporation

e

Potency for PTEN mRNA reduction in mouse liver from single dose study

f

Potency for PTEN mRNA reduction in mouse liver from 3-week study