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. Author manuscript; available in PMC: 2012 Sep 1.

Published in final edited form as: Methods. 2011 Jul 29;55(1):94–106. doi: 10.1016/j.ymeth.2011.07.005

A) The main Phenix graphical user interface (GUI) window. User projects are shown on the left of the window, with the current project shown with a green check mark. Projects can be created, selected and deleted. The procedures that can be applied to the data within a project are shown on the right of the main window. Each blue banner can be folded or unfolded with a mouse click, revealing the available programs (those for model building are shown here). A number of other tools are available through the icons at the top of the window, or from pull down menus. B) The Job History tab is used to provide a list of the jobs run within a project. The job name, date of execution, directory containing the results, and free R-factor at the end of the job (if applicable) are recorded. Details for a job can be viewed with the Show details button (details window shown as inset).

A) The main Phenix graphical user interface (GUI) window. User projects are shown on the left of the window, with the current project shown with a green check mark. Projects can be created, selected and deleted. The procedures that can be applied to the data within a project are shown on the right of the main window. Each blue banner can be folded or unfolded with a mouse click, revealing the available programs (those for model building are shown here). A number of other tools are available through the icons at the top of the window, or from pull down menus. B) The Job History tab is used to provide a list of the jobs run within a project. The job name, date of execution, directory containing the results, and free R-factor at the end of the job (if applicable) are recorded. Details for a job can be viewed with the Show details button (details window shown as inset).