Table 2.
Description of a new set of candidate genes tested.
| Gene Identification1 | Gene name | tblastx results | Putative function/reference | ||
|---|---|---|---|---|---|
| Best hit (characterised) | |||||
| Locus | Description | Score | |||
| AB042193.1 | TaWIN1 | OSU65958 | O. sativa 14-3-3 protein homolog | 571 | 14-3-3 like protein family [62] |
| AF244997.1 | ADP glucose pyrophosphorylase small subunit | Z48562 | H. vulgare mRNA for ADP-glucose pyrophosphorylase small subunit | 1138 | ADP-glucose pyrophosphorylase small subunit [71] |
| AF251264.1 | Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase B (RcaB) | BLYRCAB | H. vulgare rubisco activase (RcaB) | 576 | Rubisco activase [72] |
| AJ457980.1 | TaFNR1I | AB035645 | Z. mays L-FNRII mRNA for ferredoxin | 687 | Ferredoxin-NADP(H) oxidoreductase [73] |
| AJ635206.1 | Rubisco small subunit (rbcS) | HVU43493 | H. vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA | 328 | Photosynthesis related genes [23] |
| AL827977.1 | T. aestivum mitochondrion rrn26 gene for rRNA large subunit 26S (Z11889.1) | Z11889 | T. aestivum mitochondrion rrn26 gene for rRNA large subunit (26S) | 150 | Similar to mitochondrion rRNA 26S [23] |
| AY587265.1 | NRT1.1 | AF140606 | O. sativa nitrate transporter (NRT1) | 889 | Low affinity nitrate transporter NTR 1.1 [74] |
| AY727927.1 | ADP-glucose pyrophosphorylase small subunit | AF537363 | H. vulgare subsp. vulgare ADP-glucose pyrophosphorylase small subunit | 1054 | ADP-glucose pyrophosphorylase small subunit [75] |
| NP_114282 | CLP gene for proteolytic subunit of ATP-dependent protease | X54484 | Wheat chloroplast clpP gene for proteolytic subunit of ATP-dependent protease | 1136 | [23] |
| NP_114267.1 | RuBisCO large subunit | EU492898 | T. aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 759 | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [76] |
| X14348.1 | ADP-glucose pyrophosophorylase (WL:AGA.1) | U66876 | H. vulgare ADP-glucose pyrophosphorylase large subunit (blpl) | 541 | ADP-glucose pyrophosophorylase [77] |