Table 1.
KIR footprints in HIV-1 sequence
| Protein | aa position | KIR-association | Consensus aa* | q-value | |
|---|---|---|---|---|---|
| 1 | Gag | 93 | KIR2DS3 | E | 0.1389 |
| 2 | Gag | 138 | KIR2DL2 | L | 0.1852 |
| 3 | Gag | 138 | KIR2DS2 | L | 0.1852 |
| 4 | Gag | 371 | KIR2DS5 | T | 0 |
| 5 | Gag | 389 | KIR3DS1 | T | 0 |
| 6 | Gag | 479 | KIR2DS1 | I | 0 |
| 7 | Vpr | 37 | KIR2DS3 | I | 0.0909 |
| 8 | Tat | 3 | KIR2DL2 | S | 0.0246 |
| 9 | Tat | 3 | KIR2DS2 | S | 0 |
| 10 | Tat | 3 | KIR3DS1 | S | 0.1311 |
| 11 | Tat | 9 | KIR2DS3 | P | 0.1311 |
| 12 | Tat | 28 | KIR2DS1 | V | 0.1311 |
| 13 | Tat | 28 | KIR2DS5 | V | 0.1339 |
| 14 | Vpu | 3 | KIR2DL3 | S | 0.0833 |
| 15 | Vpu | 71 | KIR2DL2 | M | 0.125 |
| 16 | Vpu | 74 | KIR2DL2 | H | 0.1354 |
| 17 | Env | 17 | KIR2DL2 | W | 0 |
| 18 | Env | 20 | KIR2DL2 | M | 0.1667 |
| 19 | Env | 46 | KIR3DS1 | K | 0.1667 |
| 20 | Env | 347 | KIR2DS1 | L | 0.2 |
| 21 | Env | 595 | KIR2DS1 | I | 0.2 |
| 22 | Nef | 9 | KIR2DL2 | S | 0.0833 |
*
HIV-1 consensus sequence in 91 study subjects