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. 2011 Oct;77(20):7113–7120. doi: 10.1128/AEM.00600-11

Table 1.

Novel primers and reaction conditions used in the study on FQ-resistant E. coli of animal origina

Target Primer directionb Sequence (5′-3′) Annealing temp (°C) Amplicon size (bp)
16S rRNA for qRT-PCR F GGC CGC AAG GTT AAA ACT CAA ATG 52–54 243
R AAC CGC TGG CAA CAA AGG ATA AGG
Regulatory genes
    acrR F CTT GTT GGG CCT GTT TGT CGT CAC 60 1,147
R GCT TTT GTC GGC AGA TCA CCA TTC
    marRAB F GTA CAC CGA GGC CAT CAA CGA CT 60 1,543
R GAC CGG GCT GTA TAT CAA TGT A
    rob F ACT GGG ATG CCT GGT GA 53 1,172
R CAA GCC CTA AAA CAT ACT CTA CTA
    soxRS F TTA AAA ACG ATC GCT GAA GG 53 1,132
R TTG ACG TCG GGG GAA ACC
a

All primers were designed in this study.

b

F, forward; R, reverse.