Table 1.
Target | Primer directionb | Sequence (5′-3′) | Annealing temp (°C) | Amplicon size (bp) |
---|---|---|---|---|
16S rRNA for qRT-PCR | F | GGC CGC AAG GTT AAA ACT CAA ATG | 52–54 | 243 |
R | AAC CGC TGG CAA CAA AGG ATA AGG | |||
Regulatory genes | ||||
acrR | F | CTT GTT GGG CCT GTT TGT CGT CAC | 60 | 1,147 |
R | GCT TTT GTC GGC AGA TCA CCA TTC | |||
marRAB | F | GTA CAC CGA GGC CAT CAA CGA CT | 60 | 1,543 |
R | GAC CGG GCT GTA TAT CAA TGT A | |||
rob | F | ACT GGG ATG CCT GGT GA | 53 | 1,172 |
R | CAA GCC CTA AAA CAT ACT CTA CTA | |||
soxRS | F | TTA AAA ACG ATC GCT GAA GG | 53 | 1,132 |
R | TTG ACG TCG GGG GAA ACC |
All primers were designed in this study.
F, forward; R, reverse.