Table 3.
Viral genes significantly upregulated upon Q548R IE2 infection
| Gene | Relative upregulation at time (h) postinfectiona |
||
|---|---|---|---|
| R 48 vs WT 48 | R 96 vs WT 96 | R 168 vs WT 96 | |
| US8 | 4.2 | 8.8 | 20.8 |
| US9 | 4.9 | 7 | 18.7 |
| US29 | 7.7 | 7.5 | |
| US31 | 3.5 | 5.7 | |
| US32 | 4.2 | 5.5 | |
| US32 | 4.2 | 5.5 | |
| US30 | 5.4 | 4.3 | |
| US10 | 4 | ||
| US7 | 3.5 | ||
| UL63 | 3.3 | ||
| UL111 | 2.5 | 3 | |
| UL27 | 2.5 | ||
| UL28 | 2.5 | ||
| UL74 | 2 | ||
| US11 | 2 | ||
| IE1 | 3.4 | ||
| TRS1 | 3.3 | ||
| UL11 | 2.1 | ||
| US12 | 2 | ||
| US18 | 2 | ||
| US19 | 2.1 | ||
a
Significant changes (fold) between the indicated samples are shown. WT, wild type; R, Q548R IE2. The time (number of hours) postinfection is the time at which the sample was harvested; e.g., R 48 vs WT 48 indicates the ratio of Q548R IE2 48 h p.i. to WT 48 h p.i. for a given gene. Blank cells indicate that the change did not meet the criteria for significance.