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. 2011 Nov;85(21):11146–11158. doi: 10.1128/JVI.05499-11

Table 1.

Pathway Express analysis of the host response to MDV infection in the spleen

Rank Pathway name Impact factor No. of input genes/no. of pathway genes Corrected P value
1 Leukocyte transendothelial migration 69.707 10/119 3.77E−29
2 Cell adhesion molecules 46.582 15/134 2.80E−19
3 Adherens junction 24.326 3/78 6.90E−10
4 Cytokine-cytokine receptor interaction 12.714 22/263 4.13E−05
5 Antigen processing and presentation 10.45 8/89 3.31E−04
6 Complement and coagulation cascades 10.161 10/69 4.31E−04
7 Systemic lupus erythematosus 8.129 8/144 0.002691804
8 Jak-STAT signaling pathway 8.075 15/155 0.002824351
9 Toll-like receptor signaling pathway 6.922 11/102 0.007809953
10 Graft-vs-host disease 6.241 3/42 0.014104792
11 Type II diabetes mellitus 5.744 4/45 0.021593849
12 Long-term depression 5.653 8/75 0.023331938
13 Extracellular matrix-receptor interaction 5.197 10/84 0.034288862
14 Epithelial cell signaling in Helicobacter pylori infection 4.898 9/68 0.044007875
15 Axon guidance 4.631 13/129 0.054874147
16 Apoptosis 4.538 8/89 0.059227662
17 Natural killer cell-mediated cytotoxicity 4.525 6/135 0.059861797
18 p53 signaling pathway 4.279 7/69 0.073148525
19 Transcription growth factor β signaling pathway 4.171 4/87 0.079823773
20 Allograft rejection 4.1 2/38 0.084520645
21 Tight junction 3.98 9/135 0.093054484
22 ABC transporters 3.825 5/44 0.105273951
23 Type I diabetes mellitus 3.79 2/44 0.108232933
24 Gap junction 3.507 7/96 0.135150237
25 Long-term potentiation 3.495 3/73 0.136417624
26 PPAR signaling pathway 3.486 7/70 0.137375316
27 Basal cell carcinoma 3.456 1/55 0.140612346
28 Pancreatic cancer 3.306 3/72 0.157868858
29 Neuroactive ligand-receptor interaction 3.174 11/256 0.174623126
30 Proteasome 2.969 1/48 0.203826563
31 Amyotrophic lateral sclerosis 2.891 4/56 0.216030904
32 Vibrio cholerae infection 2.775 6/62 0.235369275
33 Pathogenic Escherichia coli infection 2.737 4/54 0.242024371