Fig. A3.

Twelve modules were identified as host response subnetworks that are significantly connected using the topological overlap measure. For each plot, gray lines mark averaged log₂ intensities for individual module transcripts, with the subset of transcripts upregulated at 7 hpi represented by black dashed lines. Thick lines represent the average module log₂ intensity and are colored according to module color designation. The total number of transcripts mapping to each module is indicated above each plot.