Table 2.
Experiments with recombinant sequences
| # Frag | Thres holds | Runs | Len | Total Count | Non Rec Matches | Non Rec Subtree Relative | Non Rec Errors | Rec Count | Rec Detected | Rec Matches | Rec Subtree Relative | Rec Errors | False Pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4 | 0.75 | 100 | 600 | 4540 | 74.4% | 20.9% | 0.7% | 149 | 67.1% | 49% | 37% | 14% | 0.6% |
| 8 | 0.67 | 100 | 600 | 4540 | 73.4% | 20.6% | 0.6% | 149 | 63.3% | 55.8% | 26.3% | 17.9% | 1.9% |
| 4 | 0.9 | 100 | 1000 | 4671 | 72.8% | 21.1% | 0.3% | 212 | 67.9% | 56.9% | 27.1% | 16.0% | 0.8% |
| 8 | 0.8 | 100 | 1000 | 4674 | 74.3% | 19.9% | 0.5% | 199 | 61.3% | 52.5% | 35.3% | 12.3% | 0.8% |
| Total | 400 | 73.7% | 20.6% | 0.5% | 177.3 | 64.9% | 53.6% | 31.4% | 15.0% | 1.0% | |||