Table 2b.
Results of testing PLC_PCR and CP_PCR on environmental strains (C. perfringens and other Clostridia).
| Closest match RDP | S_ab score | NCBI GenBank accession no. | PLC_PCR | CP_PCR |
|---|---|---|---|---|
| Clostridium perfringens | 1.00 | JN048955 | + | + |
| Clostridium perfringens | 1.00 | JN048944 | + | + |
| Clostridium perfringens | 1.00 | JN048945 | + | + |
| Clostridium perfringens | 1.00 | JN048948 | + | + |
| Clostridium perfringens | 1.00 | JN048940 | + | + |
| Clostridium perfringens | 1.00 | JN048934 | + | − |
| Clostridium perfringens | 0.99 | JN048953 | + | + |
| Clostridium perfringens | 0.99 | JN048947 | − | − |
| Clostridium perfringens | 0.99 | JN048959 | + | + |
| Clostridium perfringens | 0.99 | JN048950 | + | + |
| Clostridium perfringens | 0.99 | JN048946 | + | + |
| Clostridium perfringens | 0.99 | JN048958 | + | + |
| Clostridium perfringens | 0.98 | JN048949 | + | + |
| Clostridium baratii | 0.98 | JN048942 | − | − |
| Clostridium bifermentans | 1.00 | JN048952 | + | + |
| Clostridium butyricum | 1.00 | JN048941 | − | − |
| Clostridium ghonii | 0.99 | JN048963 | − | − |
| Clostridium ghonii | 0.99 | JN048961 | − | − |
| Clostridium ghonii | 0.97 | JN048937 | − | − |
| Clostridium ghonii | 0.96 | JN048936 | − | − |
| Clostridium ghonii | 0.96 | JN048962 | − | − |
| Clostridium sardiniense | 0.98 | JN048956 | − | − |
| Clostridium sardiniense | 0.95 | JN048939 | − | − |
| Clostridium sordellii | 1.00 | JN048938 | − | − |
| Clostridium sordellii | 0.99 | JN048960 | + | + |
| Clostridium sordellii | 0.99 | JN048957 | − | − |
| Clostridium sporogenes subsp. tusciae | 0.99 | JN048943 | − | − |
| Clostridium tertium | 0.93 | JN048951 | − | − |
| Clostridium tertium | 0.88 | JN048954 | − | + |
| Eubacterium tenue | 0.98 | JN048935 | − | − |