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. Author manuscript; available in PMC: 2012 Oct 12.
Published in final edited form as: Structure. 2011 Sep 1;19(10):1485–1495. doi: 10.1016/j.str.2011.07.016

Table 1.

Crystallographic data collection and refinement statistics

Brox HD-PTP
Spacegroup P63 P1
Unit cell (a, b, c) (Å) 189.2, 189.2, 49.5 37.5, 61.3, 80.6
(α, β, γ) (°) 90, 90, 120 85.9, 81.3, 88.0
Wavelength (Å) 1.075 1.033
Resolution (Å) 50–1.95 50–1.95
 Last resolution shell (Å) 1.99–1.95 1.99–1.95
Number of reflections (total/unique) 439778/74479 174637/49890
Completeness (%) 99.8/100.0* 97.2/89.5*
I/σ(I) 12.8/2.7* 25.2/3.3*
Rmerge (%) 11.0/54.7* 8.8/35.7*
Number of protein/hetero-atoms 3041/65 5764/45
Rmsd bond lengths 0.012 Å 0.007 Å
Rmsd bond angles 1.452° 0.94°
Rwork¶¶ 14.89 % 17.22 %
Rfree‡‡ 16.71 % 21.53 %
Ramachandran plot** 97.3%/2.7%/0%/0 % 94.0%/6%/0%/0%
PDB code 3R9M 3RAU
*

Asterisked numbers correspond to the last resolution shell.

Rmerge = Σh Σi |Ii(h) − <I(h)> |/ΣhΣi Ii(h), where Ii(h) and <I(h)> are the ith and mean measurement of the intensity of reflection h.

¶¶

Rwork = Σh||Fobs (h)|−|Fcalc (h)||/Σh|Fobs (h)|, where Fobs (h) and Fcalc (h) are the observed and calculated structure factors, respectively. No I/σ cutoff was applied.

‡‡

Rfree is the R value obtained for a test set of reflections consisting of a randomly selected 5% subset of the data set excluded from refinement.

**

Residues in core (most favorable), allowed, additional allowed, and disallowed regions of the Ramachandran plot as reported by Procheck.