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. Author manuscript; available in PMC: 2012 Sep 1.
Published in final edited form as: Curr Protoc Bioinformatics. 2011 Sep;CHAPTER:Unit–6.1219. doi: 10.1002/0471250953.bi0612s35

Table 1.

Troubleshooting Guide for Basic Protocol 1

Problem Possible Cause Solution
Receiving mail that says your job failed You submitted an invalid FASTA file Read the FASTA format description here: http://www.ncbi.nlm.nih.gov/BLAST/FASTA.shtml. Submit a valid FASTA file
Receiving mail that says your job failed You submitted a FASTA file with non-unique IDs per sequence Give each sequence a unique ID, and resubmit.