Table 3. Shotgun sequencing of 12 isolates of Sinorhizobium medicae using the Roche 454 FLX platform.
Isolate | Total sequence (bp) | No. of reads | Mapped readsa |
---|---|---|---|
MLX_01 | 7 110 888 | 31 539 | 27 239 |
MLX_02 | 4 558 396 | 20 323 | 18 226 |
MLX_03 | 6 028 954 | 27 017 | 23 094 |
MLX_04 | 6 566 082 | 29 540 | 26 529 |
MLX_05 | 3 224 492 | 14 471 | 12 109 |
MLX_06 | 3 028 454 | 13 671 | 11 903 |
MLX_07 | 4 597 694 | 20 496 | 16 511 |
MLX_08 | 5 534 095 | 24 714 | 21 059 |
MLX_09 | 7 221 463 | 32 500 | 27 587 |
MLX_10 | 4 812 898 | 21 684 | 17 455 |
MLX_11 | 8 200 909 | 36 676 | 31 419 |
MLX_12 | 2 970 560 | 13 351 | 11 365 |
Total | 63 854 885 | 2 85 982 | 2 44 496 |
Number of reads mapping to the genome of S. medicae WSM 419.