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. 2011 Oct 20;7(10):e1002238. doi: 10.1371/journal.pcbi.1002238

Table 2. Number of clusters (NOC) at 1.15 Å RMSD cutoff for the MD simulations of wild-type p53 and its functional and nonfunctional mutants.

Relevant cancer mutant Functional activity NOC
wt A 21
R273H_N263V R273H A 19
R273H_N200Q_D208T R273H A 19
R273H_N235K_N239Y R273H A 23
R273H_S240R R273H A 25
R273H R273H I 27
R273H_N239S R273H I 28
R273H_R282S R273H I 31
R273H_L114G R273H I 31
G245S_N239Y G245S A 15
G245S G245S I 32
G245S_T123P G245S A 36
G245S_E286D G245S I 45
Y220C_A138G Y220C A 21
Y220C_L137R Y220C A 29
Y220C Y220C I 32
Y220C_L114G Y220C I 55

Cancer mutants are typed in bold letters, rescue mutants are italicized, and non-rescue mutants are underlined. Wild-type p53 is presented as the first line of table. Cancer mutants and their relevant second-site mutants are grouped according to their relevant cancer mutants and sorted in ascending number of clusters in each group. A: active, I: inactive. The thermodynamic stability of G245S_N239Y mutant is given in Ref 36 to be −0.14 kcal/mol.