Table 1. Teleost MiT genes.
Species | Ensembl gene ID | map location | ortholog |
---|---|---|---|
Danio rerio | ENSDARG00000003732 | chr 6 | mitfa |
ENSDARG00000076049 | chr 23 | mitfb | |
ENSDARG00000004729 | chr 8 | tfe3a | |
ENSDARG00000019457 | chr 11 | tfe3b | |
ENSDARG00000010794 | chr 11 | tfeb | |
ENSDARG00000008423 | chr 4 | tfec | |
Oryzias latipes | ENSORLG00000003123 | chr 5 | mitfa |
ENSORLG00000013461 | chr 7 | mitfb | |
ENSORLG00000014134 | chr 5 | tfe3 | |
ENSORLG00000015866 | chr 5 | tfeb | |
ENSORLG00000010461 | chr 23 | tfec | |
Takifugu rubripes | ENSTRUG00000001600 | scaffold 150 | mitfa |
ENSTRUG00000012080 | scaffold 60 | mitfb | |
ENSTRUG00000013198 | scaffold 79 | tfe3a | |
ENSTRUG00000005584 | scaffold 215 | tfe3b | |
ENSTRUG00000000653 | scaffold 79 | tfeb | |
ENSTRUG00000016827 | scaffold 8 | tfec * | |
ENSTRUG00000017315 | scaffold 2576 | tfec * | |
Tetraodon
nigroviridis |
ENSTNIG00000007360 | chr 11 | mitfa |
ENSTNIG00000012564 | chr 9 | mitfb | |
ENSTNIG00000007324 | chr 11 | tfe3a | |
ENSTNIG00000019469 | unassigned | tfe3b | |
ENSTNIG00000007281 | chr 11 | tfeb | |
ENSTNIG00000018518 | chr 19 | tfec | |
Gasterosteus
aculeatus |
ENSGACG00000011875 | group XVII | mitfa |
ENSGACG00000003425 | group XII | mitfb | |
ENSGACG00000010355 | group XVII | tfe3a | |
ENSGACG00000000794 | scaffold 141 | tfe3b | |
ENSGACG00000000364 | scaffold 27 | tfeb | |
ENSGACG00000018910 | group IV | tfec |
Coding regions of ENSTRUG00000016827 and ENSTRUG00000017315 are nearly identical at the nucleotide level and appear to represent the same gene.