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. 2011 Oct 21;6(10):e25685. doi: 10.1371/journal.pone.0025685

Table 1. Primers used for amplifications of different DENV2 NS3 sequences for construction of the different recombinant plasmids.

vectora primers Amplified regionb Recombinant plasmid
pcTPA 5′-GGGGGATATCGCTGGAGTATTGTGGG-3′c protease (4522–5076) pcTPANS3P
5′-GGGTCTAGA TTACTTTCGAAAAATGTCATC-3′d
5′-GGGGATATCAGAAAATTGACCATCATGG-3′c helicase (5077–6375) pcTPANS3H
5′-GGGGTCTAGA TTACTTTCTTCCAGCTGCA-3′d
5′-GGGGGATATCGCTGGAGTATTGTGGG-3′c NS3 (4522–6375) pcTPANS3
5′-GGGGTCTAGA TTACTTTCTTCCAGCTGCA-3′d
pcDNA3 5′-GGGGGATATC ATGGCTGGAGTATTGTGGG-3′c protease (4522–5076) pcNS3P
5′-GGGTCTAGA TTACTTTCGAAAAATGTCATC-3′d
5′-GGGGATATC ATGAGAAAATTGACCATCATGG-3′c helicase (5077–6375) pcNS3H
5′-GGGGTCTAGA TTACTTTCTTCCAGCTGCA-3′d
5′-GGGGGATATC ATGGCTGGAGTATTGTGGG-3′c NS3 (4522–6375) pcNS3
5′-GGGGTCTAGA TTACTTTCTTCCAGCTGCA-3′d
a

Vectors used for cloning.

b

Genome coordinates [64].

c

Forward primer (start codon is marked in bold type and EcoRV restriction site is underlined).

d

Reverse primer (stop codon is marked in bold type and Xba I restriction site is underlined).