Skip to main content
. 2011 Oct 21;6(10):e26719. doi: 10.1371/journal.pone.0026719

Table 2. SSR loci identified in Physalis peruviana leaf Expressed Sequence Tags (ESTs).

Repeat Type Perfect Imperfect Frequency
CDS UTRs Total CDS UTRs Total
Dinucleotide - 34 34 2 98 100 134 8%
Trinucleotide 36 81 117 178 249 427 544 36%
Tetranucleotide 1 16 17 13 69 82 99 7%
Pentanucleotide - 6 6 47 160 207 213 14%
Hexanucleotide 46 64 110 64 356 420 530 35%
Total 83 201 284 304 932 1236 1520 -
Frequency 6% 13% 19% 20% 61% 81%

The number of SSR loci identified at coding sequences (CDS) and Untranslated Regions (UTRs) by using perfect and imperfect repeat search criteria.