Table 5. Functional annotation of 10 P. peruviana contigs containing polymorphic SSR markers.

SSR Marker	GO Category: ID	Functional Annotation
SSR2	P:0006350	Transcription
SSR37	F:0016301	Kinase activity
	C:0005886	Plasma membrane
SSR54	P:0006952	Defense response
	P:0012501	Programmed cell death
	C:0044464	Cell part
	F:0000166	Nucleotide binding
SSR55	P:0051865	Protein autoubiquitination
	F:0004842	Ubiquitin-protein ligase activity
	P:0048437	Floral organ development
	P:0046621	Negative regulation of organ growth
SSR77	P:0009789	Positive regulation of abscisic acid mediated signaling pathway
	P:0006979	Response to oxidative stress
	P:0052544	Callose deposition in cell wall during defense response
	P:0009753	Response to jasmonic acid stimulus
	P:0031348	Negative regulation of defense response
	P:0008219	Cell death
	P:0009651	Response to salt stress
	P:0042742	Defense response to bacterium
	P:0009926	Auxin polar transport
	P:0010119	Regulation of stomatal movement
	P:0009408	Response to heat
	F:0005515	Protein binding
	P:0010150	Leaf senescence
	P:0048765	Root hair cell differentiation
	P:0009871	Jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway
	P:0001736	Establishment of planar polarity
	P:0050832	Defense response to fungus
	P:0010182	Sugar mediated signaling pathway
SSR92	F:0004674	Protein serine/threonine kinase activity
	P:0045449	Regulation of transcription
	P:0007169	Transmembrane receptor protein tyrosine kinase signaling pathway
	F:0005524	ATP binding
	F:0003700	Transcription factor activity
	P:0010030	Positive regulation of seed germination
	P:0006468	Protein amino acid phosphorylation
SSR110	C:0044444	Cytoplasmic part
SSR126	F:0005488	Binding
	F:0003824	Catalytic activity
SSR138	F:0016740	Transferase activity
SSR146	C:0005730	Nucleolus
	C:0016020	Membrane
	F:0003677	DNA binding

Gene ontology (GO) functional Categories: C = Cellular component, F = Molecular function, P = Biological process.