Table 4.
SNP name (p) and (genetic association) for the highest and all suggestively (p ≤ 0.001) significant SNP associations.
| SNP | GCC | BCC | Cingulum | SLF | ||
|---|---|---|---|---|---|---|
| S. parietal | RS460458(0.0001) (intergenic) | RS460458 (0.0002) (intergenic) | RS7183502(0.0001) (intergenic) | RS7183502(0.0003) (intergenic) | ||
| RS2456930(0.0003) (intergenic) | RS1545540 (0.0003) (intergenic) | RS17302400(0.0004) (intergenic) | ||||
| RS7174111 (0.0004) (intergenic) | rs12438866 (0.0008) (RORA) | |||||
| RS1869486 (0.0005) (RORA) | ||||||
| RS10459628 (0.0005) (NARG2) | ||||||
| RS12910118 (0.0006) (intergenic) | ||||||
| RS1869485(0.0007) (intergenic) | ||||||
| RS12594972 (0.001) (RORA) | ||||||
| I. parietal | N/A | RS1869485(0.001) (NARG2) | N/A | N/A | ||
| RS7174111(0.0003) (intergenic) | ||||||
| RS17270188 (0.0003) (intergenic) | ||||||
| RS1545540 (0.0003) (intergenic) | ||||||
| RS10459628 (0.0003) (NARG2) | ||||||
| RS11071529 (0.0005) (NARG2) | ||||||
| RS1869486 (0.001) (RORA) | ||||||
| M. I. temp | N/A | RS1545540 (6·10−5) (intergenic) | N/A | N/A | ||
| RS1869486 (7·10−5)(RORA) | ||||||
| RS7174111(9·10−5) (intergenic) | ||||||
| RS1869485 (0.0001) (intergenic) | ||||||
| RS10459628 (0.0002) (NARG2) | ||||||
| RS11071529 (0.0002) (NARG2) | ||||||
| RS12910118 (0.0002) (intergenic) | ||||||
| RS460458(0.0004) (intergenic) | ||||||
| RS4561404 (0.0006) (intergenic) | ||||||
| RS12909890 (0.0007) (RORA) | ||||||
| RS2456930 (0.0009) (Intergenic) | ||||||
| RS7169359 (0.0009) (intergenic) | ||||||
| RS12594972 (0.0009) (RORA) | ||||||
| Cingulate | N/A | RS4620904 (0.001) (intergenic) | N/A | N/A | ||
| M. occipt | RS17270188(0.001) (RORA) | Rs10459628(0.0003 (NARG2) | N/A | N/A | ||
| RS1545540 (0.0003) (intergenic) | ||||||
| RS7174111(0.0004) (intergenic) | ||||||
| RS1869485 (0.0008) (NARG2) | ||||||
| RS12910118 (0.0008) (intergenic) | ||||||
| L. occipt | RS7183502(0.002) (intergenic) | RS7174111(0.0003 (NARG2) | N/A | N/A | ||
| RS1545540 (0.0005) (intergenic) | ||||||
| RS12910118 (0.0006) (intergenic) | ||||||
| RS7174111(0.0007) (intergenic) | ||||||
| RS10459628 (0.0008) (NARG2) | ||||||
| Fusiform | N/A | RS1545540(8·10−5 (NARG2) | N/A | N/A | ||
| RS1869486 (9·10−5)(RORA) | ||||||
| RS7174111(0.0001) (intergenic) | ||||||
| RS10459628 (0.0002) (NARG2) | ||||||
| RS1869485 (0.0003) (intergenic) | ||||||
| RS12910118 (0.0003) (intergenic) | ||||||
| RS11071529 (0.0005) (NARG2) | ||||||
| RS460458 (0.0005) (intergenic) | ||||||
| RS4561404 (0.0006) (Intergenic) | ||||||
| RS16940027 (0.0009) (Intergenic) | ||||||
| Hippocampal | N/A | RS16940027 (0.0001) (Intergenic) | N/A | N/A | ||
| RS8041394 (0.0003) (GTF2A2) | ||||||
| RS8038077 (0.0005) (RORA) | ||||||
| RS1693534 (0.0007)(RNF111) | ||||||
| RS7882 (0.0008) (GTF2A2) |
N/A is reported for trait pairs that did not have a significant (LOD > 3.0) QTL.