Table 1.
Nomenclature | |||||
A | Cross sectional area of a pore | f⊥ | Shape factor for spheroid with longest dimension perpendicular to pore wall | ve | Electrosmotic velocity |
C | Particle concentration | fΠ | Shape factor for spheroid with longest dimension parallel to pore wall | vp | Fluid velocity |
vs | Object velocity through pore | ||||
D | Pore diameter | R | Resistance | vμ | Electrophoretic velocity |
Ds | Small pore opening diameter in a conical pore | ΔR | Change in resistance | μ | Electrophoretic mobility |
Dl | Large pore opening diameter in a conical pore | L | Pore length | Δt | Pulse duration, translocation time |
d | particle diameter | Lc | Effective resistive pore length | V | Pore volume |
EM | Electric potential | J | Event frequency | v | Particle volume |
f | Shape factor | ρ | Solution resistivity | z | Direction along pore length axis |
Measured variable |
Equation Conditions/References |
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Eq. 1 | |||
Resistance in a pore [65] | |||
Resistance R |
Eq. 2 | ||
For a cylindrical pore [6] Lc = L + 0.8Di | |||
Eq. 3 | |||
Total resistance in a conical pore. Replacing DL and L with Dz and z, the diameter of the pore at a distance z from the small opening can be used to calculate the resistance gradient profile [76]. | |||
Eq. 4 | |||
A general expression resistance change to particle and pore volume fraction [6, 65, 68]. For spherical particle (f =3/2) and d << D (S = 1) this becomes Maxwell’s theory. | |||
Eq. 5 | |||
The general expression in terms of a cylindrical pore containing a spherical particle. Combining (1) and (4). | |||
Pulse Magnitude |
Eq. 6 |
f is particle shape factor [49, 54, 68] f = 3/ 2 For spherical particles [65] f = f⊥ + (fΠ − f⊥)cos2 α |
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For non-spherical oblate and prolate spheroids as they tumble through a pore [49, 54, 68]. | |||
Eq. 7 | |||
An empirical correction factor developed to describe the non-linear trend between v and V [69, 70, 77]. | |||
Pulse Frequency |
Eq. 8 | ||
Nernst-Planck equation relating event frequency to dispersion concentration in a cylindrical pore [20]. The formula includes velocity contributions from electrophoretic and electroosmotic flow, diffusion and external pressure. | |||
Pulse Duration Δt | Eq. 9 | ||
Particle velocity through a cylindrical pore is a combination of electrokinetic and fluid flow forces [52, 78]. Diffusion velocity is considered negligible in a pore. The combined velocities are inversely proportion to the pulse duration. | |||
Eq. 10 | |||
Particle Charge (electrophoretic mobility) measurements can be made when vp and ve are negligible [50, 78]. |
Lc = L+0.8D in all following formulas (with exception of conical pore, Eq. 3). This takes into account the residual electric field outside the pore openings.