. 2011 Jul 26;12:304. doi: 10.1186/1471-2105-12-304

Table 8.

A fragment of the text output of this heterogeneous pipeline workflow (see Figure 16)

`SamToolsCamldMDtag_1.OutputNo-DuplicatesBAMfile-1.bam.bai (Binary file)`
`SamToolsCamldMDtag_1.OutputNo-DuplicatesBAMfile-1.bam (Binary file)`
`...`
`BowtieEcoli_1.OutputMAPfile-1.map (ASCII file)`
`r0`	`- gi\|110640213\|ref\|NC_008253.1\|`	`3658049`
	`ATGCTGGAATGGCGATAGTTGGGTGGGTATCGTTC`
	`45567778999:9;;<===>?@@@@AAAABCCCDE`	`0`	`32:T>G,34:G > A`
`r1`	`- gi\|110640213\|ref\|NC_008253.1\|`	`1902085`
	`CGGATGATTTTTATCCCATGAGACATCCAGTTCGG`
	`45567778999:9;;<===>?@@@@AAAABCCCDE`	`0`
`r2`	`- gi\|110640213\|ref\|NC_008253.1\|`	`3989609`
	`CATAAAGCAACAGTGTTATACTATAACAATTTTGA`
	`45567778999:9;;<===>?@@@@AAAABCCCDE`	`0`
`r5`	`+ gi\|110640213\|ref\|NC_008253.1\|`	`4249841`
	`CAGCATAAGTGGATATTCAAAGTTTTGCTGTTTTA`
	`EDCCCBAAAA@@@@?>===<;;9:99987776554`	`0`
`...`