Table 1.
Genome features of Rhodopseudomonas palustris strains.
| Genome feature | BisA53 | BisB18 | BisB5 | CGA009 | HaA2 | TIE-1 |
|---|---|---|---|---|---|---|
| DNA, total number of bases | 5505494 | 5513844 | 4892717 | 5467640 | 5331656 | 5744041 |
| DNA coding, number of bases | 4766372 | 4765045 | 4276914 | 4810459 | 4677918 | 5024837 |
| DNA G+C, number of bases | 3547887 | 3581639 | 3170860 | 3555665 | 3520939 | 3725574 |
| Genes, total number | 4996 | 5028 | 4501 | 4920 | 4788 | 5377 |
| Protein coding genes | 4914 | 4943 | 4418 | 4838 | 4712 | 5318 |
| Pseudo genes | 36 | 57 | 21 | 18 | 29 | 72 |
| RNA genes | 82 | 85 | 83 | 82 | 76 | 59 |
| Enzymes | 1196 | 1233 | 1192 | 1253 | 1259 | 1317 |
| COGs | 3529 | 3688 | 3357 | 3791 | 3637 | 3897 |
| Pfam | 3594 | 3889 | 3505 | 3810 | 3834 | 4144 |
| TIGRfam | 1501 | 1528 | 1374 | 1520 | 1451 | 1536 |
| InterPro | 3720 | 3857 | 3522 | 1850 | 3823 | 4132 |
| IMG terms | 1266 | 1303 | 1232 | 1298 | 1331 | 1259 |
| IMG pathways | 355 | 386 | 378 | 382 | 385 | 370 |
| IMG parts List | 569 | 556 | 440 | 517 | 526 | 462 |