Skip to main content
. 2011 Oct 25;5(10):e1370. doi: 10.1371/journal.pntd.0001370

Table 3. Five most abundant domains and families inferred from InterProScan in the transcriptome and ESP datasets.

Transcriptome Secretome
InterPro Accession Name Seqs (%) InterPro Accession Name Seqs (%)
Domains
1 IPR011009 Protein kinase-like domain 360 (1.1) IPR014044 CAP domain 25 (12.0)*
2 IPR013783 Immunoglobulin-like fold 288 (0.9) IPR006026 Peptidase, metallopeptidase 6 (2.9)*
3 IPR015943 WD40/YVTN repeat-like-containing domain 235 (0.7) IPR000436 Sushi/SCR/CCP 5 (2.4)*
4 IPR015880 Zinc finger, C2H2-like 223 (0.7) IPR001747 Lipid transport protein, N-terminal 5 (2.4)*
5 IPR016024 Armadillo-type fold 176 (0.5) IPR008753 Peptidase M13 5 (2.4)*
Families
1 IPR001757 ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter 80 (0.2) IPR001283 Allergen V5/Tpx-1-related 18 (8.7)*
2 IPR002198 Short-chain dehydrogenase/reductase SDR 69 (0.2) IPR000718 Peptidase M13, neprilysin 8 (3.8)*
3 IPR001283 Allergen V5/Tpx-1-related 68 (0.2) IPR001534 Transthyretin-like 5 (2.4)*
4 IPR020685 Tyrosine-protein kinase 61 (0.2) IPR008632 Nematode fatty acid retinoid binding 3 (1.4)*
5 IPR020636 Calcium/calmodulin-dependent protein kinase-like 56 (0.2) IPR009283 Apyrase 3 (1.4)*

*Indicates enrichment of the domain or the family in the ESP subset when compared to the transcriptome dataset (FDR<0.5).