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. Author manuscript; available in PMC: 2012 Dec 1.
Published in final edited form as: Allergy. 2011 Aug 23;66(12):1522–1529. doi: 10.1111/j.1398-9995.2011.02692.x

Figure 3. 3D-characterization of peptides (Table 2, 4–12) tested in this study.

Figure 3

a) Alignment of the Jug r 2 N-terminal region with the modeling template, 1PSY-pdb (Ric c 3). The residues are colored to show amino acid properties. Cys residues involved in disulfide bonding are highlighted in yellow, IgE binding sequences identified in this study (6, 8–10 in Table 2) are highlighted in gray. b) Mapping of peptides on a crystal structure of Ara h 2 and models, from SDAP or specifically prepared for this study. Structures are shown in ribbon format, with the potential epitopes shown space filling in red. Side chains with >30% surface exposure according to GETAREA are highlighted in red in the text below each.