Table III.
Associations between candidate SNPs and colon and rectal cancer
Controls | Cases |
Wald |
|||
N | N | ORa (95% CI) | P value | pACT | |
Colon | |||||
IFNG (rs1861493) | 0.0007 | 0.0019 | |||
AA | 947 | 849 | 1.00 | ||
AG/GG | 1008 | 704 | 0.79 (0.69–0.91) | ||
IRF2 rs3775554 (G > C) | 0.0205 | 0.5099 | |||
GG | 1479 | 1218 | 1.00 | ||
GC | 443 | 322 | 0.88 (0.74–1.03) | ||
CC | 34 | 15 | 0.52 (0.28–0.97) | ||
IRF2 (rs793801) | 0.0112 | 0.3392 | |||
GG | 666 | 590 | 1.00 | ||
GA/AA | 1290 | 964 | 0.84 (0.73–0.96) | ||
IRF2 (rs809909) | 0.0097 | 0.3093 | |||
TT | 878 | 626 | 1.00 | ||
TA/AA | 1078 | 929 | 1.20 (1.04–1.37) | ||
IRF3 (rs2304204) | 0.0041 | 0.0080 | |||
AA/AG | 1817 | 1397 | 1.00 | ||
GG | 139 | 157 | 1.43 (1.12–1.82) | ||
Summary score | |||||
(0–2) | 305 | 172 | 1.00 | ||
(3–5) | 911 | 653 | 1.27 (1.02–1.57) | ||
(6–7) | 555 | 524 | 1.66 (1.33–2.08) | ||
(8–10) | 185 | 206 | 1.92 (1.46–2.53) | ||
Ptrend | <0.0001 | ||||
Rectal | |||||
IFNGR1 (rs3799488) | 0.0400 | 0.1120 | |||
TT/TC | 949 | 737 | 1.00 | ||
CC | 10 | 17 | 2.30 (1.04–5.09) | ||
IFNGR2 (rs2834211) | 0.0222 | 0.0949 | |||
TT | 764 | 565 | 1.00 | ||
TC/CC | 195 | 189 | 1.31 (1.04–1.64) | ||
IRF2 (rs3733473) | 0.0173 | 0.4518 | |||
GG | 625 | 449 | 1.00 | ||
GA/AA | 334 | 305 | 1.27 (1.04–1.55) | ||
IRF2 (rs3775556) | 0.0071 | 0.2338 | |||
AA | 532 | 369 | 1 | ||
AG | 370 | 328 | 1.26 (1.03–1.54) | ||
GG | 55 | 57 | 1.48 (0.99–2.19) | ||
IRF2 (rs3775574) | 0.0029 | 0.1119 | |||
AA | 317 | 297 | 1.00 | ||
AG/GG | 642 | 457 | 0.74 (0.60–0.90) | ||
IRF4 (rs11242865) | 0.0184 | 0.1458 | |||
CC/CT | 935 | 720 | 1.00 | ||
TT | 24 | 34 | 1.90 (1.11–3.24) | ||
IRF6 (rs861020) | 0.0313 | 0.1296 | |||
GG/GA | 910 | 732 | 1.00 | ||
AA | 49 | 22 | 0.57 (0.34–0.95) | ||
IRF8 (rs1044873) | 0.0142 | 0.1317 | |||
CC/CT | 789 | 654 | 1.00 | ||
TT | 170 | 100 | 0.71 (0.55–0.93) | ||
Summary score | |||||
(0–4) | 251 | 122 | 1.00 | ||
(5–6) | 390 | 280 | 1.47 (1.13–1.92) | ||
(7–8) | 229 | 232 | 2.10 (1.58–2.79) | ||
(9–12) | 89 | 120 | 2.79 (1.96–3.96) |
OR and 95% CI adjusted for age, center, race/ethnicity and sex.