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. Author manuscript; available in PMC: 2012 Mar 1.
Published in final edited form as: J Struct Biol. 2011 Jun 17;175(3):353–361. doi: 10.1016/j.jsb.2011.06.004

Figure 3.

Figure 3

Pseudocode of the AffinityRank algorithm. The algorithm takes three inputs: the set of images, the maximum dimension of each Eigenvector and two sets of indices indicating which windows should be used as positive or negative references. The output of the algorithm is a ranking score on each window where the higher the rank the more likely the window contains a particle.