Table 1. Amount of queries processed in 10 minutes.
Input type | # of inputs processed |
Coordinates | 3,671,706 |
Intervals | 1,707,074 |
SNVs | 3,034,284 |
Closest TSS | 5,348,307 |
To evaluate Segtor's speed, we created 4 datasets and evaluated how many sites were annotated in 10 minutes (600 seconds) using a single CPU at 2.4 GHz. Perl version 5.10.1 was used as our interpreter. This speed makes Segtor a well-suited tools to routinely annotate large sets stemming from NGS runs.