Table 1. Secondary structure content for apoE3 and variants calculated from Circular Dichroism spectroscopy experiments.
apoE3 | % α-helix222 nm 1 | CDSSTR 2 | ||||
% Helix | % Strand | % Turns | % Unordered | NRMSD3 | ||
WT | 58.7±3.2 | 62 | 15 | 10 | 13 | 0.004 |
R145C | 56.8±1.2 | 59 | 16 | 11 | 14 | 0.005 |
K146E | 59.7±2.2 | 61 | 16 | 10 | 12 | 0.004 |
R136S | 59.4±4.9 | 60 | 16 | 11 | 14 | 0.004 |
Values are means ± SD from three to four experiments.
prediction is averaged over sets 4,7 and SP175.
parameter refers to quality of fit of modeled spectra to actual spectra, see reference [57].