Table 1. 3CLpro activities against doubly- and triply-substituted substrate variants. WT substrate was substituted at P3 to P5 positions to generate doubly- and triply-substituted variants. The relative activities of 3CLpro on these substrate variants are reported.
Variant sequence | HCoV-NL63 | HCoV-OC43 | SARS-CoV | IBV |
VAVLQ↓SGF | 1.23±0.40 | 1.55±0.30 | 1.80±0.31 | 1.58±0.27 |
SARLQ↓SGF | 1.14±0.24 | 1.36±0.17 | 0.97±0.12 | 1.72±0.22 |
VARLQ↓SGF | 1.70±0.07 | 1.87±0.17 | 1.70±0.17 | 3.24±0.37 |
SPVLQ↓SGF | 0.06±0.01 | 0.29±0.07 | 0.61±0.10 | 1.09±0.24 |
VPRLQ↓SGF | 0.15±0.04 | 0.91±0.12 | 0.99±0.12 | 4.33±0.98 |
SVVLQ↓SGF | 0.76±0.10 | 0.59±0.07 | 1.39±0.19 | 0.59±0.09 |
VVVLQ↓SGF | 1.23±0.06 | 0.60±0.05 | 1.97±0.19 | 0.86±0.05 |
VVRLQ↓SGF | 1.63±0.07 | 0.55±0.04 | 2.50±0.51 | 2.19±0.13 |