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. 2011 Sep 9;286(44):38546–38557. doi: 10.1074/jbc.M111.237602

TABLE 1.

Statistics from crystallographic analysis

Data Collection EMTS (Hg) apo ApHMW1C UDP-Glc::ApHMW1C Peptide::ApHMW1C
    Wavelength (Å) 1.008 0.9794 0.9794 0.9794
    Space group P212121
    Cell parameters (Å) a = 79.739 a = 80.368 a = 80.245 a = 79.701
b = 93.888 b = 94.677 b = 94.896 b = 93.262
c = 177.482 c = 176.911 c = 176.791 c = 176.705
    Resolution (Å) 50.00–3.00 (3.05–3.00) 50.00–2.10 (2.18–2.10) 50.00–2.25 (2.33–2.25) 50.00–2.45 (2.54–2.45)
    Reflections (Total / Unique) 260058 / 27518 262452 / 73875 209323 / 61133 183950 / 46099
    Completeness (%)a 96.4 (91.5) 93.3 (83.3) 92.8 (74.2) 94.1 (83.1)
    Rmerge (%)a, c 12.8 (61.2) 8.0 (29.1) 8.4 (27.1) 8.0 (30.3)
    Mean <I/σ(I)> 28.6 12.5 16.5 13.4
    Redundancya 9.5 (9.6) 3.7 (2.4) 3.6 (1.9) 4.1 (2.5)
    Sigma cutoff 0.5 0.5 0.3

Phasing
    Overall FOMb (before / after DM) 0.167 / 0.836
    Overall Phasing Power 1.09

Structure Refinement
    Resolution (Å) 2.10 2.25 2.45
    No. reflections (working/test) 70123 / 3720 57402 / 3065 43748 / 2329
    R (%)a, d/Rfreee (%) 18.4 / 22.6 18.6/24.4 17.8 / 24.3
    Number of atoms (protein/water/GOL/UDP) 9742 / 484 / 18 / - 9736 / 280 / 12 / 50 9721 / 163 / 24 / -
    Average B factor (protein/water/GOL/UDP, Å2) 25.2 / 28.2 / 43.1 / - 35.7 / 34.7 / 52.4 / 52.1 37.6 / 33.0 / 47.2 / -
    rms deviation
        Bonds (Å) 0.016 0.019 0.021
        Angles (°) 1.607 1.812 1.933

Ramachandran plot (%)
    Most favored regions 92.1 91.6 91.7
    Additional allowed regions 7.8 7.8 7.8
    Generously allowed regions 0.0 0.4 0.4
    Disallowed regions 0.2 0.2 0.2

a Completeness and Rmerge are given for overall data and for the highest resolution shell.

b The figure of merit (FOM) = |Fbest| − |F|.

c Rmerge = Inline graphic|IiI〉/|/sigma]|Ii|, where Ii is the intensity of an observation, I〉 is the mean value for that reflection, and the summations are overall equivalents.

d R-factor = Inline graphich||Fo(h)| − Fc(h)||/Inline graphichFo(h), where Fo and Fc are the observed and calculated structure factor amplitudes, respectively.

e Rfree was calculated with 5% of the data excluded from the refinement.