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. 2011 Oct 19;108(44):17963-17968. doi: 10.1073/pnas.1110735108

Table 1.

Relative thermodynamic stability in selectivity filter sites, ΔΔG(K+ → Na+), from BAR-US (or BAR for unconstrained simulations)

ΔΔG(kcal/mol) S0 S1 S2 S3 S4
Upper plane −1.4 ± 0.3 (B01) −2.2 ± 0.4 (B12) −3.9 ± 0.3 (B23) −4.7 ± 0.4 (B34)
Crystal/cage +1.7 ± 0.3 (S0) +2.6 ± 0.2 (S1) +5.42 ± 0.07 (S2) +4.96 ± 0.07 (S3) +3.97 ± 0.09 (S4)
Lower plane −2.0 ± 0.1 (B01) −2.8 ± 0.4 (B12) −3.7 ± 0.6 (B23) −3.4± 0.5 (B34)
Unconstrained −0.9 ± 0.1 −0.3± 0.3 +0.5 ± 0.3 +2.0 ± 0.4 −1.3 ± 0.4
BAR-US −0.7 ± 0.1 (1D) −0.56 ± 0.07 (1D) +0.32 ± 0.06 (1D) +1.54 ± 0.07 (1D) −1.3± 0.2 (1D)
−0.74 ± 0.07 (2D) +2.27± 0.05 (3D) +1.89 ± 0.05 (2D)

Further detail is provided in Table S1. A comparison of free energy methods is provided in Fig. S3 for individual coordination geometries.