Table 1.
Kinetic constant of Rab-LidA interactions
Rab | kon, 106 M-1 s-1 | koff, s-1 | Kd, nM | Signal |
Rab1∶GDP | — | — | < 10* | ITC |
Rab1-AMP∶GDP | — | — | < 10* | ITC |
Rab1∶mGDP | 20.2 | < 10-4* | < 0.01* | Fl |
Rab1-AMP∶mGDP | 8.2 | < 10-4* | < 0.01* | FP |
Rab1∶mGppNHp | 12.8 | Fl | ||
Rab1-AMP∶mGppNHp | 9.8 | FP | ||
Rab6∶mGDP | 9.8 | 0.048 | 4.9 | FP |
Rab6∶mGDP† | 3.5 | 0.018 | 5.1 | FP |
Rab6∶mGppNHp | 4.6 | 1.4·10-4 | 0.03 | FP |
Rab6-AMP∶mGppNHp | 6.7 | 0.032 | 4.8 | FP |
Rab8∶mGDP | 39.3 | < 10-4* | < 0.01* | Fl |
Rab8-AMP∶mGDP | 16 | FP | ||
Rab8∶mGppNHp | 43.6 | < 10-4* | < 0.01* | Fl |
Rab8-AMP∶mGppNHp | 12.8 | FP |
*Values are only estimates; FP: fluorescence polarization; Fl: fluorescence.
†Determined with full-length LidA.