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. Author manuscript; available in PMC: 2013 Jun 1.
Published in final edited form as: Pharmacogenomics J. 2011 Aug 2;12(6):521–532. doi: 10.1038/tpj.2011.30

Table 2.

Gender stratified marginal single nucleotide polypmorphism (SNP) results for abstinence rates

SNP Gene Region Chromosome Male Female
MAF SNP OR (95% CT) Observed P Adjusted Pa MAF SNP OR (95% CI) Observed P Adjusted Pa
Significant SNPs within Males
End of treatment
rs6702335b EPB41 1 0.39 0.46 (0.32–0.64) 2.30 × 10−6 3.27 × 10−5 0.39 0.93 (0.67–1.30) 6.67 × 10−1 1
rs12021667b EPB41 1 0.4 0.45 (0.32–0.64) 2.01 × 10−6 3.65 × 10−5 0.39 0.96 (0.69–1.34) 8.15 × 10−1 1
rs12027267b EPB41 1 0.4 0.46 (0.33–0.64) 2.38 × 10−6 4.04 × 10−5 0.39 0.95 (0.68–1.33) 7.62 × 10−1 1
rs12039988b EPB41 1 0.39 0.47 (0.33–0.65) 3.40 × 10−6 5.77 × 10−5 0.39 1.00 (0.72–1.40) 9.97 × 10−1 9.97 × 10−1
rs203278b EPB41 1 0.35 2.27 (1.44–3.60) 3.30 × 10−4 5.57 × 10−3 0.34 0.79 (0.50–1.25) 3.20 × 10−1 9.74 × 10−1
rs150089 EPB41 1 0.32 1.71 (1.23–2.39) 1.48 × 10−3 2.20 × 10−2 0.31 0.86 (0.61–1.23) 4.09 × 10−1 9.91 × 10−1
rs2985322 EPB41 1 0.32 1.71 (1.23–2.39) 1.48 × 10−3 2.22 × 10−2 0.31 0.87 (0.61–1.24) 4.38 × 10−1 9.94 × 10−1
rs578776 CHRNA3;CHRNA5 15 0.24 1.75 (1.21–2.54) 2.86 × 10−3 2.85 × 10−2 0.21 0.94 (0.63–1.39) 7.47 × 10−1 9.99 × 10−1
rs4654390 EPB41 1 0.5 0.62 (0.45–0.85) 2.48 × 10−3 3.50 × 10−2 0.49 0.98 (0.72–1.34) 8.97 × 10−1 1
rs10915216 EPB41 1 0.5 0.62 (0.45–0.85) 2.68 × 10−3 3.72 × 10−2 0.49 0.97 (0.71–1.33) 8.70 × 10−1 1
6-month Follow-up
rs6702335b EPB41 1 0.39 0.46 (0.31–0.67) 3.44 × 10−5 6.97 × 10−4 0.39 1.11 (0.77–1.59) 5.87 × 10−1 1
rs12027267b EPB41 1 0.4 0.46 (0.31–0.68) 3.89 × 10−5 7.95 × 10−4 0.39 1.17 (0.81–1.69) 3.97 × 10−1 9.91 × 10−1
rs12021667b EPB41 1 0.4 0.48 (0.32–0.70) 8.25 × 10−5 1.61 × 10−3 0.39 1.16 (0.80–1.66) 4.37 × 10−1 9.96 × 10−1
rs12039988b EPB41 1 0.39 0.40 (0.24–0.66) 2.89 × 10−4 5.26 × 10−3 0.39 1.53 (0.89–2.63) 1.20 × 10−1 7.83 × 10−1
rs2238687 FOSB 19 0.14 2.17 (1.33–3.55) 2.42 × 10−3 1.48 × 10−2 0.14 1.57 (0.99–2.49) 6.30 × 10−2 2.62 × 10−1
rs11101694 CALY 10 0.13 0.42 (0.21–0.85) 1.01 × 10−2 3.74 × 10−2 0.12 0.84 (0.44–1.59) 5.89 × 10−1 5.89 × 10−1
rs16837840 EPB41 1 0.11 2.40 (1.38–4.17) 2.46 × 10−3 3.78 × 10−2 0.1 0.70 (0.35–1.41) 3.01 × 10−1 9.71 × 10−1

Significant SNPs within Females
End of treatment
rs4809549 CHRNA4 20 0.47 1.00 (0.74–1.35) 9.96 × 10−1 9.96 × 10−1 0.48 0.59 (0.42–0.83) 1.99 × 10−3 1.69 × 10−2
rs7123797 ANKK1 11 0.34 0.95 (0.62–1.46) 8.23 × 10−1 1 0.34 0.46 (0.29–0.73) 8.58 × 10−4 1.86 ×10−2
rs4938012 ANKK1 11 0.33 0.97 (0.63–1.48) 8.74 × 10−1 1 0.33 0.47 (0.29–0.74) 1.09 × 10−3 2.33 × 10−2
rs17115439 ANKK1 11 0.33 0.94 (0.61–1.44) 7.67 × 10−1 1 0.33 0.47 (0.30–0.75) 1.45 × 10−3 3.02 × 10−2
rs4938015 ANKK1 11 0.33 0.94 (0.61–1.44) 7.67 × 10−1 1 0.33 0.47 (0.30–0.75) 1.49 × 10−3 3.10 × 10−2
6-month Follow-up
rs3766927 CHRNB2 1 0.31 0.86 (0.53–1.39) 5.30 × 10−1 7.77 × 10−1 0.29 0.45 (0.26–0.76) 2.24 × 10−3 1.92 × 10−2
rs1127314 CIIRNB2 1 0.31 0.88 (0.62–1.27) 4.99 × 10−1 7.99 × 10−1 0.29 0.53 (0.34–0.82) 2.48 × 10−3 2.07 × 10−2
rs2834600 CLIC6 21 0.13 0.89 (0.51–1.57) 6.93 × 10−1 9.87 × 10−1 0.14 2.29 (1.34–3.91) 2.86 × 10−3 3.08 × 10−2
rs17759598 MAPK1 22 0.17 0.87 (0.55–1.39) 5.67 × 10−1 9.82 × 10−1 0.14 0.44 (0.23–0.83) 5.60 × 10−3 3.71 × 10−2
rs2131902 CHRMB2 1 0.32 0.82 (0.50–1.33) 4.20 × 10−1 8.24 × 10−1 0.3 0.49 (0.29–0.82) 5.66 × 10−3 4.33 × 10−2

All models were adjusted for age, FTND, and treatment.

SNPs above the dashed line have adjusted P-values < 0.05 within males. SNPs below the dashed line have adjusted P-values < 0.05 within females.

a

P-values adjusted for the number of correlated tests within respective gene regions.

b

Adjusted SNP × Gender Interaction P-value < 0.05.