Table 2.
Bacteriophages isolated and characterized in this study
| Phageb | Sampling site | Isolation strain | Phage family | Approximate genome size (kbp)c | RISA groupd |
|---|---|---|---|---|---|
| FJy-1 | Lake Jyväsjärvi | B80 | Myoviridae | 30 | |
| FJy-2 | Lake Jyväsjärvi | B167 | NDa | >48 | |
| FJy-3 | Lake Jyväsjärvi | B169 | Myoviridae | L | |
| FKo-1 | Lake Konnevesi | B28 | Myoviridae | 25–48 | |
| FKo-2 | Lake Konnevesi | B28 | Myoviridae | 20–30 | |
| FKe-1 | River Kevojoki | B114 | Myoviridae | ND | |
| FTs-1 | River Tsarsjoki | B121 | ND | 25–48 | |
| FKj-1 | Lake Kevojärvi | B127 | ND | >48 | |
| FKj-2 | Lake Kevojärvi | B130 | Myoviridae | 25–48 | |
| FKy-1 | River Kymijoki | B222 | Myoviridae | 20–48 | |
| FKy-2 | River Kymijoki | B223 | Podoviridae? | 25–48 | |
| FKy-3 | River Kymijoki | B224 | Myoviridae? | L | |
| FLe-1 | Lake Leppävesi | B176 | Siphoviridae? | 20–30 | |
| FL-1 | Fishery L | B183 | Myoviridae | 55 | |
| FV-1 | Fishery V | B214 | Myoviridae | 28 | |
| FV-2 | Fishery V | B218 | ND | 25–48 | |
| FV-3 | Fishery V | B225 | Myoviridae | ND | |
| FV-4 | Fishery V | B226 | Podoviridae | 25–48 | |
| FV-5 | Fishery V | B241 | ND | L | |
| FV-6 | Fishery V | B243 | ND | 30–40 | |
| FV-8 | Fishery V | B257 | ND | L | |
| FV-9 | Fishery V | B260 | Podoviridae? | L | |
| FV-10 | Fishery V | B262 | ND | L | |
| FV-11 | Fishery V | B263 | ND | >48 | |
| FV-12 | Fishery V | B278 | Podoviridae? | 60 | |
| FCL-1 | Fishery L | B67 | Myoviridae/Podoviridae | 50 | A |
| FCL-2 | Fishery L | B185 | Myoviridae | 30 | G |
| FCL-3 | Fishery L | R-G | ND | 30 | G |
| FCL-4 | Fishery L | R-G | ND | ND | G |
| FCV-1 | Fishery V | Rz-C | Myoviridae | 50 | C |
| FCV-2 | Fishery V | B235 | ND | ND | C |
| FCV-3 | Fishery V | B236 | ND | ND | C |
| FCV-4 | Fishery V | Rz-C | ND | ND | C |
| FCV-5 | Fishery V | Rz-C | ND | ND | C |
| FCV-6 | Fishery V | Rz-C | ND | ND | C |
| FCV-7 | Fishery V | Rz-C | ND | ND | C |
| FCV-8 | Fishery V | Rz-C | ND | ND | C |
| FCV-9 | Fishery V | B245 | ND | ND | C |
| FCV-10 | Fishery V | B247 | ND | ND | C |
| FCV-11 | Fishery V | Rz-C | ND | ND | C |
| FCV-12 | Fishery V | Rz-C | ND | ND | C |
| FCV-13 | Fishery V | B261 | ND | ND | C |
| FCV-14 | Fishery V | Rz-C | ND | ND | C |
| FCV-15 | Fishery V | Rz-C | ND | ND | C |
| FCV-16 | Fishery V | Rz-C | ND | ND | C |
| FCV-17 | Fishery V | Rz-C | ND | ND | C |
| FCV-18 | Fishery V | Rz-C | ND | ND | C |
| FCV-19 | Fishery V | Rz-C | ND | ND | C |
| FCV-20 | Fishery V | Rz-C | ND | ND | C |
a
ND, not determined.
b
The first letter(s) of the phage name indicates the isolation host (F, Flavobacterium sp.; FC, F. columnare); subsequent letters refer to the sampling site.
c
L, much larger than the typical tailed phage genome (50 kb).
d
The F. columnare RISA group that the phage is specific to.