Table 2.

Corrected pairwise distances per 100 sites of reverse transcriptase domains 1 to 4 of mysTR elements containing ORFs within and between selected clades from Fig. 2

Speciesa	Pairwise distance/100 sitesa
	C. callosus-N. spinosus	O. palustris	A. boliviensis	S. hispidus	P. maniculatus 1	P. maniculatus 2	R. fulvescens 1	R. fulvescens 2	N. sumichrasti
L1 inactive
C. callosus-N. spinosus	0.22–8.56
O. palustris	6.18–11.16	2.25–5.21
A. boliviensis	27.85–31.28	30.62–35.6	0.42–4.26
L1 active
S. hispidus	27.07–34.56	29.53–34.44	23.71–27.07	0.21–3.83
P. maniculatus 1	23.37–27.22	27.46–28.40	33.98–37.80	33.16–36.27	Only 1 ORF
P. maniculatus 2	17.29–25.63	20.44–28.41	27.76–35.17	27.58–33.91	21.02–26.66	0–6.90
R. fulvescens 1	24.55–28.96	27.63–30.76	34.08–38.70	30.16–34.58	4.67–5.21	21.17–28.19	0–1.10
R. fulvescens 2	16.53–22.75	21.65–24.42	27.23–31.19	28.22–31.92	22.50–25.32	4.22–10.06	22.12–24.14	0–2.02
N. sumichrasti	22.86–33.86	26.42–30.10	34.20–41.13	29.05–33.22	27.98–29.73	16.62–21.99	25.48–28.48	19.64–24.31	0.22–3.00

^aReverse transcriptase domains of mysTR elements containing ORFs within selected clades from Fig. 2 are shaded.