. Author manuscript; available in PMC: 2013 Jan 1.

Published in final edited form as: Genes Chromosomes Cancer. 2011 Oct 2;51(1):66–76. doi: 10.1002/gcc.20932

Table 4.

Top ten pathways over-represented in genes affected by CNA in each tumor.

GO Biological Process	# Tumors Affected (%)
Defense response to bacterium	24 (38.7)
Regulation of apoptosis	21 (33.9)
Response to organic substance	19 (20.6)
Cell-cell signaling	16 (25.8)
Protein complex assembly	15 (24.2)
Response to oxidative stress	14 (22.6)
Cell death	14 (22.6)
Regulation of cell proliferation	14 (22.6)
Positive regulation of developmental process	14 (22.6)
Neurofilament cytoskeleton organization	14 (22.6)