Table 2.

Odds ratios (OR) for the 11 SNPs for the Baltic, Danish and Norwegian UC panels¹

		Baltic1 441 UC cases/1156 controls					Danish 560 UC cases/796 controls					Norwegian1 274 UC cases/282 controls					European1 3989 co/1822 ca
SNP	A1	FCA	FCO	OR	95% CI	PCCA	FCA	FCO	OR	95% CI	PCCA	FCA	FCO	OR	95% CI	PCCA	FCA
rs7520292	A	0.20	0.20	1.04	0.85-1.25	0.71	0.17	0.16	1.01	0.81-1.24	0.94	0.16	0.16	1.00	0.73-1.38	0.96	0.20
rs1488266 BTLA	C	0.06	0.06	0.95	0.69-1.29	0.72	0.10	0.11	0.91	0.71-1.16	0.45	0.09	0.10	0.90	0.60-1.36	0.64	0.10
rs3103190	G	0.40	0.41	0.98	0.83-1.14	0.76	0.30	0.33	0.87	0.73-1.02	0.09	0.31	0.31	0.99	0.77-1.27	0.95	0.34
rs12518307	A	0.33	0.33	1.00	0.84-1.17	0.99	0.27	0.23	1.19	1.00-1.42	0.04	0.27	0.26	1.04	0.79-1.35	0.77	0.25
rs2395609 TCP11	G	0.29	0.30	0.92	0.77-1.09	0.35	0.34	0.33	1.04	0.88-1.23	0.60	0.35	0.36	0.97	0.76-1.24	0.83	0.32
rs7809799 SMURF1/KPNA71	G	0.07	0.05	1.42	1.03-1.94	0.03	0.03	0.04	0.86	0.57-1.27	0.44	0.04	0.02	1.6	0.86-3.23	0.11	0.05
rs6966125 TNP03	G	0.21	0.20	1.01	0.83-1.22	0.89	0.15	0.14	1.10	0.88-1.36	0.40	0.12	0.14	0.84	0.59-1.19	0.33	0.16
rs638300	T	0.15	0.14	1.09	0.88-1.35	0.42	0.20	0.20	0.97	0.80-1.17	0.77	0.21	0.19	1.10	0.82-1.48	0.49	0.21
rs6119625 FER1L4	G	0.15	0.14	1.08	0.87-1.34	0.47	0.13	0.12	1.11	0.88-1.39	0.37	0.13	0.10	1.28	0.89-1.83	0.17	0.15
rs6125345	C	0.17	0.18	0.93	0.75-1.13	0.45						0.19	0.16	1.20	0.88-1.63	0.24	0.20
rs5771069 IL17REL	A	0.50	0.52	0.93	0.79-1.08	0.31	0.49	0.50	0.97	0.82-1.12	0.67	0.43	0.53	0.69	0.54-0.87	0.002	0.49

¹Data for the 11 SNPs in the Norwegian panel, for rs5771069 and rs7809799 in the Baltic panel, and the allele frequencies for the combined German, British, Belgian, and Greek panel is from Franke et al [7].

A1: minor allele; F: allele frequency of A1 for cases (F_CA) or controls (F_CO), respectively; 95%CI: 95% confidence interval; P_CCA: P-value (Pearson's χ² test on allele counts with one degree of freedom); nominal significant P-values are highlighted by bold type