Table 2. Integration sites in tumors with novel CIS.
| Tumor | CIS | Copy # | other insertions in tumor |
| C3H C | Tcf7l2 | 105 | Serpinb8,Lhx4,Cdca1,Nmt2,Qscn6l1,Eya2,Zfp217,Tpd52,Slc44a3,Rbm35a,Fgfr3,Aff1,Antxr1,Prkaca,Bai3,Cdh8,Pgr,Igsf4a,Hcrtr2,Plod2,Ctdspl,Hsf2,Slc39a11,Tnfsf11,Krt85,Casr,Safb2,Cdh2,Gypc,Atp8b1,Gm815,Cyp2c29,Usp9x,Actrt1,Pgr15l,Eda2r,E230019M04Rik,Gpr64,BC023488,E130016E03Rik,AL033314,4930544G11Rik,LOC432436,LOC628586,2310022M17Rik,6030413G23Rik,4921528I01Rik, |
| C3H BF | 9 | Atp9a,Sfrs8,A430010J10Rik,Wnt1,Prodh,Tcf7l2 | |
| BALB 5 | Antxr1 | ND | Kcne4,Htra1,BC035537,Wnt3,Calml3,2410141K09Rik |
| C3H C | See above | ||
| C3H A | Arhgap18 | 10 | 1700001O22Rik,Dhrs9,Eltd1,F730047E07Rik,Rod1,2810055G22Rik,Pon1,Cnga4,Mgmt,Fgf3,Tpcn2,Hhip,Bai3,1110059P08Rik,Btbd11,C630004H02Rik,Fbxo33,Drd1a,Ubqln1,Emb,Sh2d4b,Azin1,Olfr161, Epha6,Gbe1,Dnahc8,Tbn |
| C3H BN | ND | 4933421I07Rik, Ins2 | |
| C3H A | Bai3 | See above | |
| C3H C | See above | ||
| C3H C | Prkaca | See above | |
| C3H P | 10 | Rab2,Coro2a,D030010E02Rik,Fgf3,Nfatc3,Lpin3 | |
| C3H F | Pdgfra | 17 | Scg2,Cxxc4,Cacna2d1,Prss23,Foxl1,Mark3,Lrrc16,Wnt10b,Vbp1 |
| C3H D | 12 | Gpr88,AW049829,Fgfr2,Fgf3,Tbc1d9,Six6os1,Hes1,Htr2c | |
| BALB 45 | Igf2 | ND | 1700011F14Rik |
| BALB 11 | 12 | Cxcl5 | |
| C3H BN | 4933421I07Rik, Arhgap18 |
All of the identified integration sites in tumors with novel CIS (see Table I) are listed. Additional CIS found in the tumors are underlined.