Table 1.
Variable Substrateb | kcat (min−1) |
Km (mM) |
kcat/Km (min−1 mM−1) |
% kcat of pyruvate carboxylation |
|
---|---|---|---|---|---|
Pyruvate carboxylation | MgATPc | 396 ± 10d | 0.145 ± 0.009 | 2670 ± 120 | (100) |
HCO3− | 700 ± 20 | 10.8 ± 0.4 | 64.8 ± 0.9 | --- | |
pyruvate | 440 ± 8d | 0.15 ± 0.01 | 2900 ± 150 | --- | |
Full reverse reaction | MgADP | 0.835 ± 0.005 | 0.12 ± 0.02 | 6.95 ± 0.002 | 0.2 |
Oxamate-induced decarboxylation of oxaloacetate | NDe | 9.03 ± 0.04f | --- | ---- | 2.0 |
HCO3−- dependent ATPase | MgATP | 2.58 ± 0.09 | 0.022 ± 0.003 | 115 ± 2 | 0.6 |
ADP phosphorylation | Carbamoyl phosphate | 2.41 ± 0.01 | 2.6 ± 0.5 | 0.93 ± 0.02 | 0.6 |
Acetyl phosphate | 0.56 ± 0.02 | 0.34 ± 0.02 | 1.70 ± 0.05 | 0.1 |
Kinetic parameters were determined from data fits to eqn (1).
Varied substrate indicated, all other substrates were held constant at saturating concentrations. Reaction conditions: 50 mM Bis-tris, 25 mM Tricine, 25 mM Glycine (pH 7.5), 25° C, 0.25 mM acetyl-CoA. For more detailed reaction conditions see Methods section.
kcat (min−1) and kcat/Km (min−1 mM−1) were determined from fits of the initial rates of pyruvate carboxylation at varying concentrations of MgATP and fixed Mg2+ to the equation for an equilibrium ordered pattern (eqn (2)) and the Kia Mg2+ = 1.2 ± 0.2 mM . All other kcat and kcat/Km values were determined from fits to the eqn (1).
Apparent kcat.
ND = not determined.
Specific activity, determined in triplicate with saturating concentrations of all substrates and activators.