TABLE 3.
Genetic diversity at the seven loci examined in this study
| Locus | Fragment length (bp)a | No. of polymorphic sitesb | % of variable nucleotide sites | No. of alleles | Avg G + C content (%) | Avg dN/dS ratio | Avg distance between allelesc |
|---|---|---|---|---|---|---|---|
| adk | 450 (648) | 55 (36) | 12.2 | 27 | 38.5 | 0.0809 | 0.031 (0.012) |
| ccpA | 418 (996) | 67 (48) | 16.0 | 38 | 36.1 | 0.0454 | 0.034 (0.014) |
| ftsA | 401 (1,299) | 37 (36) | 9.2 | 25 | 41.4 | 0.0024 | 0.023 (0.014) |
| glpT | 330 (1,347) | 86 (62) | 26.1 | 40 | 44.8 | 0.0494 | 0.080 (0.040) |
| pyrE | 404 (630) | 60 (45) | 14.9 | 40 | 40.3 | 0.0328 | 0.023 (0.009) |
| recF | 470 (1,125) | 110 (77) | 23.4 | 33 | 34.0 | 0.0420 | 0.072 (0.043) |
| sucC | 504 (1,158) | 85 (67) | 16.9 | 34 | 36.7 | 0.0378 | 0.040 (0.017) |
a
The numbers in parentheses are total lengths of the genes.
b
The numbers in parentheses are numbers of synonymous polymorphic sites.
c
Percentage of nucleotide differences. The numbers in parentheses are standard deviations.